Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rachicladosporium_20antarcticum_20[genbank_20GCA_5F002077065.1_20201
7-04-03] 267 sequences; 47,410,550 total letters
Query= NC_013699.1
Length=5018
Score E
Sequences producing significant alignments: (Bits) Value
seq146 279 2e-71
seq184 273 7e-70
>seq146
Length=780984
Score = 279 bits (308), Expect = 2e-71
Identities = 394/548 (72%), Gaps = 17/548 (3%)
Strand=Plus/Minus
Query 372 GGAACCACAGCAGCTACCGTCTCCCGCGTTCGCGCCCTTTACGACTTCACGCCCTCGGAA 431
|| || || || || || ||| ||||| | ||||| || ||||||||||| || ||
Sbjct 615723 GGGACTACGGCTGCGACTGTCAGTCGCGTGAGGGCCCTGTATGACTTCACGCCTTCCGAG 615664
Query 432 CCCGGCGAGTTGGCTTTCCGCAAAGGCGACATTATTGCGGTTCTCGAGTCTGTGTACAAG 491
| |||||| |||| || || |||||||||||| || | ||| |||||||||
Sbjct 615663 GCAGGCGAGCTGGCGTTTAAGAAGAACGACATTATTGCTGTGTTGGAGAGTGTGTACAAA 615604
Query 492 GACTGGTGGAAGGGTTCTCTGCGTGGACAGACCGGCATCTTCCCCCTCAACTATGTCGAG 551
|||||||||||||| |||||| || ||||| || ||||| || || |||||||| |||
Sbjct 615603 GACTGGTGGAAGGGAAGTCTGCGAGGGCAGACTGGTATCTTTCCGCTGAACTATGTGGAG 615544
Query 552 AAGCTGCAGGATCCTACCAAGGAGGAGCTCGAGAGAGAAGCTCAGATGGAGGCGGAAGTC 611
||||| |||||||||||||||| ||||| ||| | || || | |||||| |||| ||
Sbjct 615543 AAGCTCAAGGATCCTACCAAGGAAGAGCTGGAGCGGGATGCCGACATGGAGTCGGAGGTG 615484
Query 612 TTTGCGGAGATCAAGAACGTGGAGAAGCTGCTAGCTCTGCTGAGCAC---TAGTTCGAGT 668
|||| || ||| |||||| |||||| |||| || ||||||||||| | | |||
Sbjct 615483 TTTGGCGAAGTCAGGAACGTCGAGAAGTTGCTTGCGCTGCTGAGCACAGAGACTGGCAGT 615424
Query 669 GCC------GACGCTAGGGACAATGAGGAGATCACTTCGCTGTACCACAAGACAGTGTCG 722
| | | | ||||| | || |||||| | ||||| || | |||||||
Sbjct 615423 GGCAGGCGAGGGGAGAGGGAGGAAGACGAGATCGCGGACCTGTATCAGAGGACAGTGAGC 615364
Query 723 ATACGGCCGAAGTTGATCGAGCTCATTGGCAAGTATTCGCAAAAGAAGGGTAAGTGGAAT 782
||||| ||||||||| | ||||| || || ||||| ||||| ||||| ||| ||| |||
Sbjct 615363 ATACGACCGAAGTTGGTGGAGCTGATCGGGAAGTACTCGCAGAAGAAAGGTGAGTTCAAT 615304
Query 783 -CT---TTTACGCGAATTTGTGTGTTGGCCACTGATCGTGTTCCAGATGATTTCACGCAG 838
|| ||| |||| ||| || | ||||| | |||| || ||||| ||
Sbjct 615303 GCTGTAATTATGCGA--GTGTATGACAG-TACTGA-CAATCAGCAGACGACTTCACACAA 615248
Query 839 CTCAACGAGAAGTTCATCAAGGCACGCCGCGACTACGAAACCCTCCTTGAAGCCTCGATG 898
| ||||||||||||||||||||| | || || ||||| | | || |||||||| |||
Sbjct 615247 TTGAACGAGAAGTTCATCAAGGCAAGACGGGATTACGAGGCATTACTCGAAGCCTCAATG 615188
Query 899 TCGCAACC 906
||||| ||
Sbjct 615187 TCGCAGCC 615180
>seq184
Length=1511567
Score = 273 bits (302), Expect = 7e-70
Identities = 395/549 (72%), Gaps = 19/549 (3%)
Strand=Plus/Minus
Query 372 GGAACCACAGCAGCTACCGTCTCCCGCGTTCGCGCCCTTTACGACTTCACGCCCTCGGAA 431
|| || || || || || ||| ||||| | || | || ||||| ||||| || ||
Sbjct 226435 GGGACTACGGCTGCGACGGTCAGTCGCGTGAGGGCATTATATGACTTTACGCCTTCCGAG 226376
Query 432 CCCGGCGAGTTGGCTTTCCGCAAAGGCGACATTATTGCGGTTCTCGAGTCTGTGTACAAG 491
| |||||| |||| ||| || |||||| ||||| || | ||| ||||||||||
Sbjct 226375 GCAGGCGAGCTGGCGTTCAAGAAGAACGACATCATTGCCGTGTTGGAGAGTGTGTACAAG 226316
Query 492 GACTGGTGGAAGGGTTCTCTGCGTGGACAGACCGGCATCTTCCCCCTCAACTATGTCGAG 551
|||||||||||||| |||||| || ||||| || |||||||| || |||||||| |||
Sbjct 226315 GACTGGTGGAAGGGAAGTCTGCGAGGGCAGACGGGTATCTTCCCGCTGAACTATGTGGAG 226256
Query 552 AAGCTGCAGGATCCTACCAAGGAGGAGCTCGAGAGAGAAGCTCAGATGGAGGCGGAAGTC 611
||| || |||||||||||||||| ||||| ||| | || || | |||||| | || |||
Sbjct 226255 AAGTTGAAGGATCCTACCAAGGAAGAGCTTGAGCGGGATGCCGACATGGAGTCCGAGGTC 226196
Query 612 TTTGCGGAGATCAAGAACGTGGAGAAGCTGCTAGCTCTGCTGAGCAC---TAGTTCGAGT 668
|| | ||| ||| || |||||||||||||| || || ||||||| | | |||
Sbjct 226195 TTCGGTGAGGTCAGAAATGTGGAGAAGCTGCTTGCGCTATTGAGCACAGAGACTGGTAGT 226136
Query 669 GCCGACGCTA-GGGACAATGAGG-AGATCACTTCGC-----TGTACCACAAGACAGTGTC 721
| | | || | |||| | |||| ||| | |||| |||| || | ||| |||
Sbjct 226135 GGC-AGGCGAGGGGAGAGGGAGGAAGACGAGATCGCCGACTTGTATCAGAGGACTGTGAG 226077
Query 722 GATACGGCCGAAGTTGATCGAGCTCATTGGCAAGTATTCGCAAAAGAAGGGTAAGTGGAA 781
||||||||||||||| | ||| | ||||| ||||| ||||| ||||| ||| || |
Sbjct 226076 CATACGGCCGAAGTTGGTGGAGTTGATTGGGAAGTACTCGCAGAAGAAAGGTGAGCTCCA 226017
Query 782 TCT----TTTACGCGAATTTGTGTGTTGGCCACTGATCGTGTTCCAGATGATTTCACGCA 837
| | |||| |||| ||| || | ||||| | |||| || ||||| ||
Sbjct 226016 TGTTGTGTTTATGCGA--GTGTATGACAG-TACTGA-CAATCAGCAGACGACTTCACACA 225961
Query 838 GCTCAACGAGAAGTTCATCAAGGCACGCCGCGACTACGAAACCCTCCTTGAAGCCTCGAT 897
|| |||||||||||||||||||| || || |||||||| | || || |||||||| ||
Sbjct 225960 ACTGAACGAGAAGTTCATCAAGGCCCGTCGAGACTACGAGGCACTACTCGAAGCCTCAAT 225901
Query 898 GTCGCAACC 906
|||||| ||
Sbjct 225900 GTCGCAGCC 225892
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 15945553433865
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |