Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rachicladosporium_20sp._20CCFEE_205018_20[genbank_20GCA_5F002077045.
2_202017-04-03] 232 sequences; 44,765,267 total letters
Query= NC_013699.1
Length=5018
Score E
Sequences producing significant alignments: (Bits) Value
seq2 273 7e-70
>seq2
Length=2712501
Score = 273 bits (302), Expect = 7e-70
Identities = 395/549 (72%), Gaps = 19/549 (3%)
Strand=Plus/Plus
Query 372 GGAACCACAGCAGCTACCGTCTCCCGCGTTCGCGCCCTTTACGACTTCACGCCCTCGGAA 431
|| || || || || || ||| ||||| | || | || ||||| ||||| || ||
Sbjct 2321547 GGGACTACGGCTGCGACAGTCAGTCGCGTGAGGGCATTATATGACTTTACGCCTTCCGAG 2321606
Query 432 CCCGGCGAGTTGGCTTTCCGCAAAGGCGACATTATTGCGGTTCTCGAGTCTGTGTACAAG 491
| |||||| |||| ||| || |||||| ||||| || | ||| ||||||||||
Sbjct 2321607 GCAGGCGAGCTGGCGTTCAAGAAGAACGACATCATTGCCGTGTTGGAGAGTGTGTACAAG 2321666
Query 492 GACTGGTGGAAGGGTTCTCTGCGTGGACAGACCGGCATCTTCCCCCTCAACTATGTCGAG 551
|||||||||||||| |||||| || ||||| || |||||||| || |||||||| |||
Sbjct 2321667 GACTGGTGGAAGGGAAGTCTGCGAGGGCAGACGGGTATCTTCCCGCTGAACTATGTGGAG 2321726
Query 552 AAGCTGCAGGATCCTACCAAGGAGGAGCTCGAGAGAGAAGCTCAGATGGAGGCGGAAGTC 611
||| || |||||||||||||||| ||||| ||| | || || | |||||| | || |||
Sbjct 2321727 AAGTTGAAGGATCCTACCAAGGAAGAGCTTGAGCGGGATGCCGACATGGAGTCCGAGGTC 2321786
Query 612 TTTGCGGAGATCAAGAACGTGGAGAAGCTGCTAGCTCTGCTGAGCAC---TAGTTCGAGT 668
|| | ||| ||| || |||||||||||||| || || ||||||| | | |||
Sbjct 2321787 TTCGGTGAGGTCAGAAATGTGGAGAAGCTGCTTGCGCTATTGAGCACAGAGACTGGTAGT 2321846
Query 669 GCCGACGCTA-GGGACAATGAGG-AGATCACTTCGC-----TGTACCACAAGACAGTGTC 721
| | | || | |||| | |||| ||| | |||| |||| || | ||| |||
Sbjct 2321847 GGC-AGGCGAGGGGAGAGGGAGGAAGACGAGATCGCCGACTTGTATCAGAGGACTGTGAG 2321905
Query 722 GATACGGCCGAAGTTGATCGAGCTCATTGGCAAGTATTCGCAAAAGAAGGGTAAGTGGAA 781
|| |||||||||||| | ||| | ||||| ||||| ||||| ||||| ||| || |
Sbjct 2321906 CATCCGGCCGAAGTTGGTGGAGTTGATTGGGAAGTACTCGCAGAAGAAAGGTGAGCTCCA 2321965
Query 782 TCT----TTTACGCGAATTTGTGTGTTGGCCACTGATCGTGTTCCAGATGATTTCACGCA 837
| | |||| |||| ||| || | ||||| | |||| || ||||| ||
Sbjct 2321966 TGTTGTGTTTATGCGA--GTGTATGACAG-TACTGA-CAATCAGCAGACGACTTCACACA 2322021
Query 838 GCTCAACGAGAAGTTCATCAAGGCACGCCGCGACTACGAAACCCTCCTTGAAGCCTCGAT 897
|| ||||||||||||||||||||||| || |||||||| | || || |||||||| ||
Sbjct 2322022 ACTGAACGAGAAGTTCATCAAGGCACGTCGAGACTACGAGGCACTACTCGAAGCCTCAAT 2322081
Query 898 GTCGCAACC 906
|||||| ||
Sbjct 2322082 GTCGCAGCC 2322090
Score = 260 bits (288), Expect = 4e-66
Identities = 391/548 (71%), Gaps = 17/548 (3%)
Strand=Plus/Plus
Query 372 GGAACCACAGCAGCTACCGTCTCCCGCGTTCGCGCCCTTTACGACTTCACGCCCTCGGAA 431
|| || || || || || ||| ||||| | || | || ||||| ||||| || ||
Sbjct 2251170 GGGACTACGGCTGCGACAGTCAGTCGCGTGAGGGCGTTATATGACTTTACGCCTTCCGAG 2251229
Query 432 CCCGGCGAGTTGGCTTTCCGCAAAGGCGACATTATTGCGGTTCTCGAGTCTGTGTACAAG 491
| |||||| |||| ||| || |||||| ||||| || | || ||| ||||||
Sbjct 2251230 GCAGGCGAGCTGGCGTTCAAGAAGAACGACATCATTGCCGTATTGGAAAGTGTATACAAG 2251289
Query 492 GACTGGTGGAAGGGTTCTCTGCGTGGACAGACCGGCATCTTCCCCCTCAACTATGTCGAG 551
|||||||||||||| |||||| || ||||| || |||||||| || |||||||| |||
Sbjct 2251290 GACTGGTGGAAGGGAAGTCTGCGAGGGCAGACGGGTATCTTCCCGCTGAACTATGTGGAG 2251349
Query 552 AAGCTGCAGGATCCTACCAAGGAGGAGCTCGAGAGAGAAGCTCAGATGGAGGCGGAAGTC 611
||| || | |||||||||||||| ||||| ||| | || || | |||||| | || |||
Sbjct 2251350 AAGTTGAAAGATCCTACCAAGGAAGAGCTGGAGCGGGATGCCGACATGGAGTCCGAGGTC 2251409
Query 612 TTTGCGGAGATCAAGAACGTGGAGAAGCTGCTAGCTCTGCTGAGCAC---TAGTTCGAGT 668
|| | ||| ||| || |||||||||||||| || || ||||||| | | |||
Sbjct 2251410 TTCGGTGAGGTCAGAAATGTGGAGAAGCTGCTTGCGCTATTGAGCACAGAGACTGGTAGT 2251469
Query 669 GCCGACGCTAGG-GACAATGAGG-AGATCACTTCGC-----TGTACCACAAGACAGTGTC 721
| | | || ||| || | |||| ||| | |||| |||| || | ||| |||
Sbjct 2251470 GGC-AGGCGAGGAGAGAGGGAGGAAGACGAGATCGCCGACTTGTATCAGAGGACTGTGAG 2251528
Query 722 GATACGGCCGAAGTTGATCGAGCTCATTGGCAAGTATTCGCAAAAGAAGGGTAAGTGGAA 781
||||||||||||||| | || | ||||| ||||| ||||| ||||| ||| || ||
Sbjct 2251529 CATACGGCCGAAGTTGGTGGAATTGATTGGGAAGTACTCGCAGAAGAAAGGTGAGCTCAA 2251588
Query 782 TCTTTTACGCGAATTTGTGTGTTGGCC---ACTGATCGTGTTCCAGATGATTTCACGCAG 838
| | || | || | |||| | | ||||| | | |||| || ||||| ||
Sbjct 2251589 TGCTGTATTC--ATGCGAGTGTACGACAGTACTGA-CAAGCAGCAGACGACTTCACACAA 2251645
Query 839 CTCAACGAGAAGTTCATCAAGGCACGCCGCGACTACGAAACCCTCCTTGAAGCCTCGATG 898
| ||||||||||||||||| ||||| || |||||||| | || || ||||||||||||
Sbjct 2251646 TTGAACGAGAAGTTCATCAAAGCACGTCGAGACTACGAGGCACTACTCGAAGCCTCGATG 2251705
Query 899 TCGCAACC 906
||||| ||
Sbjct 2251706 TCGCAGCC 2251713
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 15945559538040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |