Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Raffaelea_20quercivora_20[genbank_20GCA_5F001662465.1_202016-06-08]
26 sequences; 25,862,907 total letters
Query= NC_013699.1
Length=5018
Score E
Sequences producing significant alignments: (Bits) Value
seq3 161 3e-36
>seq3
Length=3655701
Score = 161 bits (178), Expect = 3e-36
Identities = 206/284 (73%), Gaps = 0/284 (0%)
Strand=Plus/Plus
Query 372 GGAACCACAGCAGCTACCGTCTCCCGCGTTCGCGCCCTTTACGACTTCACGCCCTCGGAA 431
||| |||| || || || || ||||| || ||||| || | ||||| | |||| ||
Sbjct 1043446 GGATCCACGGCGGCCACGGTGTCCCGGGTGCGCGCGCTCTTTGACTTTGCCGCCTCCGAG 1043505
Query 432 CCCGGCGAGTTGGCTTTCCGCAAAGGCGACATTATTGCGGTTCTCGAGTCTGTGTACAAG 491
|||| |||| | | ||| || |||||| | ||||| || || || || ||||||
Sbjct 1043506 CCCGACGAGCTCGACTTCAAGAAGGGCGACGTGATTGCCGTGCTGGAATCCGTGTACCGT 1043565
Query 492 GACTGGTGGAAGGGTTCTCTGCGTGGACAGACCGGCATCTTCCCCCTCAACTATGTCGAG 551
||||||||| || ||||| || | || |||||||||||||||||||| || |||
Sbjct 1043566 GACTGGTGGCGCGGCTCTCTCAAGGGCCGCACGGGCATCTTCCCCCTCAACTACGTGGAG 1043625
Query 552 AAGCTGCAGGATCCTACCAAGGAGGAGCTCGAGAGAGAAGCTCAGATGGAGGCGGAAGTC 611
| ||| || || || ||| ||||| || | || || ||||||||||| |||||
Sbjct 1043626 ATCCTGGCCGACCCGACGCCGGACGAGCTGCAGCGTGAGGCGCAGATGGAGGCCGAAGTG 1043685
Query 612 TTTGCGGAGATCAAGAACGTGGAGAAGCTGCTAGCTCTGCTGAG 655
||||| ||||| ||||| || ||||||||||| | || |||||
Sbjct 1043686 TTTGCCGAGATTAAGAATGTCGAGAAGCTGCTGACGCTCCTGAG 1043729
Score = 84.2 bits (92), Expect = 7e-13
Identities = 79/101 (78%), Gaps = 0/101 (0%)
Strand=Plus/Plus
Query 821 CCAGATGATTTCACGCAGCTCAACGAGAAGTTCATCAAGGCACGCCGCGACTACGAAACC 880
||||| || || || || || |||||||||||||||||||| |||||||||||||| |
Sbjct 1043962 CCAGACGACTTTACCCAACTGAACGAGAAGTTCATCAAGGCTCGCCGCGACTACGAGTCT 1044021
Query 881 CTCCTTGAAGCCTCGATGTCGCAACCAGCGCAGCCCGGCTA 921
|| | || |||||||| | || || ||||||| ||||
Sbjct 1044022 CTGTTGGAGTCCTCGATGGCCCACCCGCCGCAGCCGAGCTA 1044062
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 15945595465470
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |