Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Raffaelea_20quercus-
mongolicae_20[genbank_20GCA_5F002215975.1_202017-07-07] 43 sequences; 27,005,990 total letters
Query= NC_013699.1
Length=5018
Score E
Sequences producing significant alignments: (Bits) Value
seq11 170 6e-39
>seq11
Length=5116797
Score = 170 bits (188), Expect = 6e-39
Identities = 208/284 (73%), Gaps = 0/284 (0%)
Strand=Plus/Minus
Query 372 GGAACCACAGCAGCTACCGTCTCCCGCGTTCGCGCCCTTTACGACTTCACGCCCTCGGAA 431
||| ||||||| || || || ||||| || |||||||| | |||||| | | || ||
Sbjct 1280063 GGATCCACAGCCGCCACGGTGTCCCGTGTGCGCGCCCTCTTCGACTTTGCCGCATCTGAG 1280004
Query 432 CCCGGCGAGTTGGCTTTCCGCAAAGGCGACATTATTGCGGTTCTCGAGTCTGTGTACAAG 491
|| | |||| | | ||| || ||||| || ||||| || ||||| || ||||||
Sbjct 1280003 CCGGACGAGCTCGACTTCAAGAAGGGCGATATCATTGCCGTGCTCGAATCGGTGTACCGT 1279944
Query 492 GACTGGTGGAAGGGTTCTCTGCGTGGACAGACCGGCATCTTCCCCCTCAACTATGTCGAG 551
|| |||||| || ||||| || | || ||||||||||| ||||| |||||||||
Sbjct 1279943 GATTGGTGGCGCGGCTCTCTCAAGGGCCGCACGGGCATCTTCCCGCTCAATTATGTCGAG 1279884
Query 552 AAGCTGCAGGATCCTACCAAGGAGGAGCTCGAGAGAGAAGCTCAGATGGAGGCGGAAGTC 611
| ||| || || || ||| ||||| || | || |||||||||||||| || ||
Sbjct 1279883 ATCCTGGCCGACCCGACGCCGGACGAGCTACAGCGTGAGGCTCAGATGGAGGCCGAGGTG 1279824
Query 612 TTTGCGGAGATCAAGAACGTGGAGAAGCTGCTAGCTCTGCTGAG 655
||||| ||||||||||| || ||||||||| | |||| |||||
Sbjct 1279823 TTTGCCGAGATCAAGAATGTCGAGAAGCTGTTGACTCTCCTGAG 1279780
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 15945592500585
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |