Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Raffaelea_20quercus- mongolicae_20[genbank_20GCA_5F002215975.1_202017-07-07] 43 sequences; 27,005,990 total letters Query= NC_013699.1 Length=5018 Score E Sequences producing significant alignments: (Bits) Value seq11 170 6e-39 >seq11 Length=5116797 Score = 170 bits (188), Expect = 6e-39 Identities = 208/284 (73%), Gaps = 0/284 (0%) Strand=Plus/Minus Query 372 GGAACCACAGCAGCTACCGTCTCCCGCGTTCGCGCCCTTTACGACTTCACGCCCTCGGAA 431 ||| ||||||| || || || ||||| || |||||||| | |||||| | | || || Sbjct 1280063 GGATCCACAGCCGCCACGGTGTCCCGTGTGCGCGCCCTCTTCGACTTTGCCGCATCTGAG 1280004 Query 432 CCCGGCGAGTTGGCTTTCCGCAAAGGCGACATTATTGCGGTTCTCGAGTCTGTGTACAAG 491 || | |||| | | ||| || ||||| || ||||| || ||||| || |||||| Sbjct 1280003 CCGGACGAGCTCGACTTCAAGAAGGGCGATATCATTGCCGTGCTCGAATCGGTGTACCGT 1279944 Query 492 GACTGGTGGAAGGGTTCTCTGCGTGGACAGACCGGCATCTTCCCCCTCAACTATGTCGAG 551 || |||||| || ||||| || | || ||||||||||| ||||| ||||||||| Sbjct 1279943 GATTGGTGGCGCGGCTCTCTCAAGGGCCGCACGGGCATCTTCCCGCTCAATTATGTCGAG 1279884 Query 552 AAGCTGCAGGATCCTACCAAGGAGGAGCTCGAGAGAGAAGCTCAGATGGAGGCGGAAGTC 611 | ||| || || || ||| ||||| || | || |||||||||||||| || || Sbjct 1279883 ATCCTGGCCGACCCGACGCCGGACGAGCTACAGCGTGAGGCTCAGATGGAGGCCGAGGTG 1279824 Query 612 TTTGCGGAGATCAAGAACGTGGAGAAGCTGCTAGCTCTGCTGAG 655 ||||| ||||||||||| || ||||||||| | |||| ||||| Sbjct 1279823 TTTGCCGAGATCAAGAATGTCGAGAAGCTGTTGACTCTCCTGAG 1279780 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 15945592500585