Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Reticulascus_20tulasneorum_20[genbank_20GCA_5F001557495.1_202016-02-
10] 75 sequences; 42,602,674 total letters
Query= NC_013699.1
Length=5018
Score E
Sequences producing significant alignments: (Bits) Value
seq14 199 1e-47
>seq14
Length=1339294
Score = 199 bits (220), Expect = 1e-47
Identities = 243/328 (74%), Gaps = 5/328 (2%)
Strand=Plus/Plus
Query 372 GGAACCACAGCAGCTACCGTCTCCCGCGTTCGCGCCCTTTACGACTTCACGCCCTCGGAA 431
|| ||||| || || || || || | || ||||| || | |||||| || || ||
Sbjct 187845 GGTACCACCGCCGCCACTGTGTCGAGGGTGCGCGCACTGTTCGACTTTGTCCCGTCCGAG 187904
Query 432 CCCGGCGAGTTGGCTTTCCGCAAAGGCGACATTATTGCGGTTCTCGAGTCTGTGTACAAG 491
||||||||| ||| ||| || |||||| | ||||||||||||||||| || ||||||
Sbjct 187905 CCCGGCGAGCTGGAATTCAAGAAGGGCGACGTGATTGCGGTTCTCGAGTCAGTCTACAAG 187964
Query 492 GACTGGTGGAAGGGTTCTCTGCGTGGACAGACCGGCATCTTCCCCCTCAACTATGTCGAG 551
||||||||| || || ||| || |||| ||||| ||||| | ||||| ||||||
Sbjct 187965 GACTGGTGGCGAGGCTCGCTGAAGGGCAAGACTGGCATTTTCCCGTTGAACTACGTCGAG 188024
Query 552 AAGCTGCAGGATCCTACCAAGGAGGAGCTCGAGAGAGAAGCTCAGATGGAGGCGGAAGTC 611
|| || ||| || || ||| ||||| || | || || ||||||||||| || ||
Sbjct 188025 AAACTTACGGACCCCACACCGGACGAGCTGCAGCGGGAGGCGCAGATGGAGGCCGAGGTG 188084
Query 612 TTTGCGGAGATCAAGAACGTGGAGAAGCTGCTAGCTCTGCTGAGCA---CTAGTTCGAGT 668
|| || ||||| ||||||||||||||| |||| |||||||||| | ||| | || |
Sbjct 188085 TTCGCTGAGATAAAGAACGTGGAGAAGTTGCTTACTCTGCTGAGTACTTCTAATACG-GC 188143
Query 669 GCCGACGCTAG-GGACAATGAGGAGATC 695
||||| | || ||| ||||||||||||
Sbjct 188144 GCCGAGGGAAGAGGATAATGAGGAGATC 188171
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 15945586919625
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |