Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhinocladiella_20mackenziei_20[genbank_20GCA_5F001723215.1_202016- 09-12] 893 sequences; 32,602,137 total letters Query= NC_013699.1 Length=5018 Score E Sequences producing significant alignments: (Bits) Value seq31 271 2e-69 >seq31 Length=78921 Score = 271 bits (300), Expect = 2e-69 Identities = 399/559 (71%), Gaps = 23/559 (4%) Strand=Plus/Plus Query 369 TCTGGAACCACAGCAGCTACCGTCTCCCGCGTTCGCGCCCTTTACGACTTCACGCCCTCG 428 || || || ||||| || || || || | || || || || | ||||| || ||| Sbjct 61210 TCGGGCACAACAGCTGCCACAGTTTCAAGAGTACGAGCGCTGTTTGACTTTCAACCTTCG 61269 Query 429 GAACCCGGCGAGTTGGCTTTCCGCAAAGGCGACATTATTGCGGTTCTCGAGTCTGTGTAC 488 |||||||| || || ||||||||||| || |||| ||||| |||||||| || ||| Sbjct 61270 GAACCCGGTGAATTACAATTCCGCAAAGGAGATGTTATAGCGGTCCTCGAGTCAGTATAC 61329 Query 489 AAGGACTGGTGGAAGGGTTCTCTGCGTGGACAGACCGGCATCTTCCCCCTCAACTATGTC 548 ||||||||||||||||| ||||| ||||| ||||| || || |||||| | ||||| || Sbjct 61330 AAGGACTGGTGGAAGGGCTCTCTTCGTGGGCAGACGGGAATTTTCCCCTTAAACTACGTT 61389 Query 549 GAGAAGCTGCAGGATCCTACCAAGGAGGAGCTCGAGAGAGAAGCTCAGATGGAGGCGGAA 608 ||||| || || ||||| || || ||| | ||| ||| || || |||||||| ||| Sbjct 61390 GAGAAACTACAAGATCCAACACCAGAAGAGTTGCAGAAAGAGGCGCAAATGGAGGCCGAA 61449 Query 609 GTCTTTGCGGAGATCAAGAACGTGGAGAAGCTGCTAGCTCTGCTGAGCACTAGTTCGAGT 668 || |||| | ||||||||||||||||||||| | ||| || ||||||| ||| | Sbjct 61450 GTGTTTGGACAAATCAAGAACGTGGAGAAGCTGTTGGCTTTGTTGAGCACGAGT---ACA 61506 Query 669 GCCG------ACGCTAGGGACAATGAGGAGATCACTTCGCTGTACCACAAGACAGTGTCG 722 |||| ||| || || |||||||||||||| ||| || |||| || | || Sbjct 61507 GCCGACATGAACGTCAGAGATAATGAGGAGATCACCGAGCTCTATCACAGTACGTTATCA 61566 Query 723 ATACGGCCGAAGTTGATCGAGCTCATTGGCAAGTATTCGCAAAAGAAGGGTAAGTGGAAT 782 || |||||||| | || || | ||||| ||||| | |||||||| ||| || Sbjct 61567 ATCAGGCCGAAGCTCATTGAATTGATTGGGAAGTACACCCAAAAGAAAGGT------AAC 61620 Query 783 CTTTTACGCGAAT-TTGT-GTG--TTGGCCA---CTGATCGTGTTCCAGATGATTTCACG 835 | | | || ||| |||| ||| || | |||| | | | |||||| ||| | Sbjct 61621 CATGAAGGCCAATATTGTCGTGGCATGAGGATGGCTGACAGCG-ACTAGATGACTTCCAG 61679 Query 836 CAGCTCAACGAGAAGTTCATCAAGGCACGCCGCGACTACGAAACCCTCCTTGAAGCCTCG 895 || ||||||||||| |||||||| ||||| |||||||||||| | | | || | ||| Sbjct 61680 CAACTCAACGAGAAATTCATCAAAGCACGTCGCGACTACGAAGCGTTATTAGAGTCTTCG 61739 Query 896 ATGTCGCAACCAGCGCAGC 914 ||| | || |||| |||| Sbjct 61740 ATGGCCCAGTCAGCACAGC 61758 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 15945444256335