Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhinocladiella_20mackenziei_20[genbank_20GCA_5F001723235.1_202016- 09-12] 1,475 sequences; 33,409,556 total letters Query= NC_013699.1 Length=5018 Score E Sequences producing significant alignments: (Bits) Value seq479 280 5e-72 >seq479 Length=67388 Score = 280 bits (310), Expect = 5e-72 Identities = 401/559 (72%), Gaps = 23/559 (4%) Strand=Plus/Minus Query 369 TCTGGAACCACAGCAGCTACCGTCTCCCGCGTTCGCGCCCTTTACGACTTCACGCCCTCG 428 || || || ||||| || || || || | || || || || | ||||| || ||| Sbjct 17730 TCGGGCACAACAGCTGCCACAGTTTCAAGAGTACGAGCGCTGTTTGACTTTCAACCTTCG 17671 Query 429 GAACCCGGCGAGTTGGCTTTCCGCAAAGGCGACATTATTGCGGTTCTCGAGTCTGTGTAC 488 |||||||| || || ||||||||||| || |||| ||||| |||||||| || ||| Sbjct 17670 GAACCCGGTGAATTACAATTCCGCAAAGGAGATGTTATAGCGGTCCTCGAGTCAGTATAC 17611 Query 489 AAGGACTGGTGGAAGGGTTCTCTGCGTGGACAGACCGGCATCTTCCCCCTCAACTATGTC 548 ||||||||||||||||| ||||| ||||| ||||| || || |||||| | |||||||| Sbjct 17610 AAGGACTGGTGGAAGGGCTCTCTTCGTGGGCAGACGGGAATTTTCCCCTTAAACTATGTT 17551 Query 549 GAGAAGCTGCAGGATCCTACCAAGGAGGAGCTCGAGAGAGAAGCTCAGATGGAGGCGGAA 608 ||||| || || ||||| || || ||| | ||| ||| || || |||||||| ||| Sbjct 17550 GAGAAACTACAAGATCCAACACCAGAAGAGTTGCAGAAAGAGGCGCAAATGGAGGCCGAA 17491 Query 609 GTCTTTGCGGAGATCAAGAACGTGGAGAAGCTGCTAGCTCTGCTGAGCACTAGTTCGAGT 668 || |||| | ||||||||||||||||||||| | ||| || ||||||| ||| | Sbjct 17490 GTGTTTGGACAAATCAAGAACGTGGAGAAGCTGTTGGCTTTGTTGAGCACGAGT---ACA 17434 Query 669 GCCG------ACGCTAGGGACAATGAGGAGATCACTTCGCTGTACCACAAGACAGTGTCG 722 |||| ||| || || ||||||||||||||| ||| || |||| || | || Sbjct 17433 GCCGACATGAACGTCAGAGATAATGAGGAGATCACTGAGCTCTATCACAGTACGTTATCA 17374 Query 723 ATACGGCCGAAGTTGATCGAGCTCATTGGCAAGTATTCGCAAAAGAAGGGTAAGTGGAAT 782 || |||||||| | || || | ||||| ||||| | |||||||| ||| || Sbjct 17373 ATCAGGCCGAAGCTCATTGAATTGATTGGGAAGTACACCCAAAAGAAAGGT------AAC 17320 Query 783 CTTTTACGCGAAT-TTGT-GTG--TTGGCCA---CTGATCGTGTTCCAGATGATTTCACG 835 | | | || ||| |||| ||| || | |||| | | | |||||| ||| | Sbjct 17319 CATGAAGGCCAATATTGTCGTGGCATGAGGATGGCTGACAGCG-ACTAGATGACTTCCAG 17261 Query 836 CAGCTCAACGAGAAGTTCATCAAGGCACGCCGCGACTACGAAACCCTCCTTGAAGCCTCG 895 || ||||||||||| |||||||| ||||| |||||||||||| | | | || | ||| Sbjct 17260 CAACTCAACGAGAAATTCATCAAAGCACGTCGCGACTACGAAGCGTTATTAGAGTCTTCG 17201 Query 896 ATGTCGCAACCAGCGCAGC 914 ||| | || |||| |||| Sbjct 17200 ATGGCCCAGTCAGCACAGC 17182 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 15945342752625