Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhynchosporium_20agropyri_20[genbank_20GCA_5F900074905.1_202016-10-
26] 508 sequences; 52,477,121 total letters
Query= NC_013699.1
Length=5018
Score E
Sequences producing significant alignments: (Bits) Value
seq143 239 1e-59
>seq143
Length=216591
Score = 239 bits (264), Expect = 1e-59
Identities = 231/294 (79%), Gaps = 2/294 (1%)
Strand=Plus/Minus
Query 367 CATCTGGAACCACAGCAGCTACCGTCTCCCGCGTTCGCGCCCTTTACGACTT-CACGCCC 425
|||| ||||| |||||||| || || ||||| || | ||||||| ||| || || ||
Sbjct 119898 CATCCGGAACGACAGCAGCCACGGTATCCCGAGTCAGAGCCCTTTTCGATTTTCATGCTA 119839
Query 426 TCGGAACCCGGCGAGTTGGCTTTCCGCAAAGGCGACATTATTGCGGTTCTCGAGTCTGTG 485
|| | || | |||||| ||||||| ||||||||| | ||||||||||| || || |||
Sbjct 119838 CCG-ATCCGGATGAGTTGACTTTCCGGAAAGGCGACGTAATTGCGGTTCTGGAATCAGTG 119780
Query 486 TACAAGGACTGGTGGAAGGGTTCTCTGCGTGGACAGACCGGCATCTTCCCCCTCAACTAT 545
||||||||||||||||| ||| | || | |||||||| || ||||| || || ||||||
Sbjct 119779 TACAAGGACTGGTGGAAAGGTCTTTTGAGAGGACAGACGGGTATCTTTCCTCTGAACTAT 119720
Query 546 GTCGAGAAGCTGCAGGATCCTACCAAGGAGGAGCTCGAGAGAGAAGCTCAGATGGAGGCG 605
|| ||||||||| ||||| || ||| || || | |||||||||| ||||||||
Sbjct 119719 GTTGAGAAGCTGGCAGATCCAACTTCGGATGAACTGCAACGAGAAGCTCAAATGGAGGCC 119660
Query 606 GAAGTCTTTGCGGAGATCAAGAACGTGGAGAAGCTGCTAGCTCTGCTGAGCACT 659
|| ||||||||||||||||||||||||||||| || || | || ||||| |||
Sbjct 119659 GAGGTCTTTGCGGAGATCAAGAACGTGGAGAAACTACTTACACTACTGAGTACT 119606
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 15945511402260
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |