Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhynchosporium_20commune_20[genbank_20GCA_5F900074885.1_202016-10- 26] 164 sequences; 55,639,110 total letters Query= NC_013699.1 Length=5018 Score E Sequences producing significant alignments: (Bits) Value seq105 235 2e-58 >seq105 Length=2038561 Score = 235 bits (260), Expect = 2e-58 Identities = 229/292 (78%), Gaps = 2/292 (1%) Strand=Plus/Plus Query 369 TCTGGAACCACAGCAGCTACCGTCTCCCGCGTTCGCGCCCTTTACGACTT-CACGCCCTC 427 || ||||| |||||||| || || ||||| || | ||||||| ||| || || || | Sbjct 568536 TCCGGAACGACAGCAGCCACGGTATCCCGAGTCAGAGCCCTTTTCGATTTTCATGCTACC 568595 Query 428 GGAACCCGGCGAGTTGGCTTTCCGCAAAGGCGACATTATTGCGGTTCTCGAGTCTGTGTA 487 | | || | ||||||| ||||||| ||||||||| | |||||||| || || || ||||| Sbjct 568596 G-ATCCGGACGAGTTGACTTTCCGGAAAGGCGACGTAATTGCGGTACTGGAATCAGTGTA 568654 Query 488 CAAGGACTGGTGGAAGGGTTCTCTGCGTGGACAGACCGGCATCTTCCCCCTCAACTATGT 547 ||||||||||||||| ||| | || | |||||||| || ||||| || || |||||||| Sbjct 568655 CAAGGACTGGTGGAAAGGTCTTTTGAGAGGACAGACGGGTATCTTTCCTCTGAACTATGT 568714 Query 548 CGAGAAGCTGCAGGATCCTACCAAGGAGGAGCTCGAGAGAGAAGCTCAGATGGAGGCGGA 607 ||||||||| ||||| || ||| || || | |||||||||| |||||||| || Sbjct 568715 TGAGAAGCTGGCAGATCCAACTTCGGATGAACTGCAACGAGAAGCTCAAATGGAGGCCGA 568774 Query 608 AGTCTTTGCGGAGATCAAGAACGTGGAGAAGCTGCTAGCTCTGCTGAGCACT 659 ||||||||||||||||||||||||||||| || || | || ||||| ||| Sbjct 568775 GGTCTTTGCGGAGATCAAGAACGTGGAGAAACTACTTACACTACTGAGTACT 568826 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 15945571397580