Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhynchosporium_20commune_20[genbank_20GCA_5F900074885.1_202016-10-
26] 164 sequences; 55,639,110 total letters
Query= NC_013699.1
Length=5018
Score E
Sequences producing significant alignments: (Bits) Value
seq105 235 2e-58
>seq105
Length=2038561
Score = 235 bits (260), Expect = 2e-58
Identities = 229/292 (78%), Gaps = 2/292 (1%)
Strand=Plus/Plus
Query 369 TCTGGAACCACAGCAGCTACCGTCTCCCGCGTTCGCGCCCTTTACGACTT-CACGCCCTC 427
|| ||||| |||||||| || || ||||| || | ||||||| ||| || || || |
Sbjct 568536 TCCGGAACGACAGCAGCCACGGTATCCCGAGTCAGAGCCCTTTTCGATTTTCATGCTACC 568595
Query 428 GGAACCCGGCGAGTTGGCTTTCCGCAAAGGCGACATTATTGCGGTTCTCGAGTCTGTGTA 487
| | || | ||||||| ||||||| ||||||||| | |||||||| || || || |||||
Sbjct 568596 G-ATCCGGACGAGTTGACTTTCCGGAAAGGCGACGTAATTGCGGTACTGGAATCAGTGTA 568654
Query 488 CAAGGACTGGTGGAAGGGTTCTCTGCGTGGACAGACCGGCATCTTCCCCCTCAACTATGT 547
||||||||||||||| ||| | || | |||||||| || ||||| || || ||||||||
Sbjct 568655 CAAGGACTGGTGGAAAGGTCTTTTGAGAGGACAGACGGGTATCTTTCCTCTGAACTATGT 568714
Query 548 CGAGAAGCTGCAGGATCCTACCAAGGAGGAGCTCGAGAGAGAAGCTCAGATGGAGGCGGA 607
||||||||| ||||| || ||| || || | |||||||||| |||||||| ||
Sbjct 568715 TGAGAAGCTGGCAGATCCAACTTCGGATGAACTGCAACGAGAAGCTCAAATGGAGGCCGA 568774
Query 608 AGTCTTTGCGGAGATCAAGAACGTGGAGAAGCTGCTAGCTCTGCTGAGCACT 659
||||||||||||||||||||||||||||| || || | || ||||| |||
Sbjct 568775 GGTCTTTGCGGAGATCAAGAACGTGGAGAAACTACTTACACTACTGAGTACT 568826
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 15945571397580
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |