Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhynchosporium_20secalis_20[genbank_20GCA_5F900074895.1_202016-10- 26] 2,130 sequences; 49,411,302 total letters Query= NC_013699.1 Length=5018 Score E Sequences producing significant alignments: (Bits) Value seq1123 239 1e-59 >seq1123 Length=142039 Score = 239 bits (264), Expect = 1e-59 Identities = 231/294 (79%), Gaps = 2/294 (1%) Strand=Plus/Minus Query 367 CATCTGGAACCACAGCAGCTACCGTCTCCCGCGTTCGCGCCCTTTACGACTT-CACGCCC 425 |||| ||||| |||||||| || || ||||| || | ||||||| ||| || || || Sbjct 133032 CATCCGGAACGACAGCAGCCACGGTATCCCGAGTCAGAGCCCTTTTCGATTTTCATGCTA 132973 Query 426 TCGGAACCCGGCGAGTTGGCTTTCCGCAAAGGCGACATTATTGCGGTTCTCGAGTCTGTG 485 || | || | |||||| ||||||| ||||||||| | ||||||||||| || || ||| Sbjct 132972 CCG-ATCCGGATGAGTTGACTTTCCGGAAAGGCGACGTAATTGCGGTTCTGGAATCAGTG 132914 Query 486 TACAAGGACTGGTGGAAGGGTTCTCTGCGTGGACAGACCGGCATCTTCCCCCTCAACTAT 545 ||||||||||||||||| ||| | || | |||||||| || ||||| || || |||||| Sbjct 132913 TACAAGGACTGGTGGAAAGGTCTTTTGAGAGGACAGACGGGTATCTTTCCTCTGAACTAT 132854 Query 546 GTCGAGAAGCTGCAGGATCCTACCAAGGAGGAGCTCGAGAGAGAAGCTCAGATGGAGGCG 605 || ||||||||| ||||| || ||| || || | |||||||||| |||||||| Sbjct 132853 GTTGAGAAGCTGGCAGATCCAACTTCGGATGAACTGCAACGAGAAGCTCAAATGGAGGCC 132794 Query 606 GAAGTCTTTGCGGAGATCAAGAACGTGGAGAAGCTGCTAGCTCTGCTGAGCACT 659 || ||||||||||||||||||||||||||||| || || | || ||||| ||| Sbjct 132793 GAGGTCTTTGCGGAGATCAAGAACGTGGAGAAACTACTTACACTACTGAGTACT 132740 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 15945228517350