Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rosellinia_20necatrix_20[genbank_20GCA_5F001445595.3_202017-02-01] 239 sequences; 44,257,831 total letters Query= NC_013699.1 Length=5018 Score E Sequences producing significant alignments: (Bits) Value seq82 176 1e-40 >seq82 Length=146269 Score = 176 bits (194), Expect = 1e-40 Identities = 211/287 (74%), Gaps = 0/287 (0%) Strand=Plus/Minus Query 372 GGAACCACAGCAGCTACCGTCTCCCGCGTTCGCGCCCTTTACGACTTCACGCCCTCGGAA 431 || || || || || || || || ||||| ||||| || || |||||| ||| ||||| Sbjct 55676 GGTACGACTGCTGCCACTGTGTCACGCGTCCGCGCTCTGTATGACTTCGTGCCTTCGGAG 55617 Query 432 CCCGGCGAGTTGGCTTTCCGCAAAGGCGACATTATTGCGGTTCTCGAGTCTGTGTACAAG 491 ||||||||| | | ||| | || || ||| | || || || || ||||| || ||||| Sbjct 55616 CCCGGCGAGCTTGAATTCAGGAAGGGAGACGTCATCGCAGTGCTAGAGTCGGTCTACAAA 55557 Query 492 GACTGGTGGAAGGGTTCTCTGCGTGGACAGACCGGCATCTTCCCCCTCAACTATGTCGAG 551 ||||||||| || || || || ||||| |||||||| |||||||| || |||||| Sbjct 55556 GACTGGTGGCGCGGCTCACTAAAAGGCCAGACGGGCATCTTTCCCCTCAATTACGTCGAG 55497 Query 552 AAGCTGCAGGATCCTACCAAGGAGGAGCTCGAGAGAGAAGCTCAGATGGAGGCGGAAGTC 611 ||||| ||| || || || || || | || || || ||||||||||| || || Sbjct 55496 AAGCTCACGGACCCAACGCCCGATGAACTGCATAGGGAGGCCCAGATGGAGGCCGAGGTA 55437 Query 612 TTTGCGGAGATCAAGAACGTGGAGAAGCTGCTAGCTCTGCTGAGCAC 658 || || || ||||| |||||||||||| |||| | || |||||||| Sbjct 55436 TTCGCCGAAATCAAAAACGTGGAGAAGTTGCTCACGCTACTGAGCAC 55390 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 15945558317205