Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rutstroemia_20echinophila_20[genbank_20GCA_5F000812885.1_202014-12-
31] 7,345 sequences; 40,250,382 total letters
Query= NC_013699.1
Length=5018
Score E
Sequences producing significant alignments: (Bits) Value
seq2541 141 3e-30
>seq2541
Length=2298
Score = 141 bits (156), Expect = 3e-30
Identities = 236/338 (70%), Gaps = 5/338 (1%)
Strand=Plus/Minus
Query 364 TTGCATCTGGAACCACAGCAGCTACCGTCTCCCGCGTTCGCGCCCTTTACGACTTCACGC 423
|| ||||||| || ||||| ||||| || || | || || || | || ||| |
Sbjct 1385 TTCCATCTGGCACAACAGCCGCTACAGTTTCGAGAGTAAAAGCGCTATTTGATTTCCAGG 1326
Query 424 CCTCGGAACCCGGCGAGTTGGCTTTCCGCAAAGGCGACATTATTGCGGTTCTCGAGTCTG 483
|| | || || | || || || | || || || || |||||||| | | ||||
Sbjct 1325 CCACTGATCCGGATGAATTACAATTTAGAAAGGGTGATATCATTGCGGTAGTTGGCTCTG 1266
Query 484 TGTACAAGGACTGGTGGAAGGGTTCTCTGCGTGGACAGACCGGCATCTTCCCCCTCAACT 543
|||| ||||||||||||| || || | || || | || || |||||||| ||||| |
Sbjct 1265 TGTATAAGGACTGGTGGAGAGGATCGTTACGAGGCAATACGGGAATCTTCCCTCTCAATT 1206
Query 544 ATGTCGAGAAGCTGCAGGATCCTACCAAGGAGGAGCTCGAGAGAGAAGCTCAGATGGAGG 603
||||||||||| || ||| || || |||||| | | ||||| || || |||||||
Sbjct 1205 ATGTCGAGAAGTTGATGGACCCAACGGCAGAGGAGTTACAAAGAGAGGCACAAATGGAGG 1146
Query 604 CGGAAGTCTTTGCGGAGATCAAGAACGTGGAGAAGCTGCTAGCTCTGCTGAGCACT---A 660
| || || ||||| ||||||||||| ||||||||| | || | || || || ||| |
Sbjct 1145 CAGAGGTGTTTGCAGAGATCAAGAATGTGGAGAAGTTACTCACACTTCTCAGTACTTCAA 1086
Query 661 GTTC-GAGTGCCGACGCTAGGGACAATGAGGAGATCAC 697
|||| |||| | | | |||| ||||| ||||| ||
Sbjct 1085 GTTCTGAGT-TGAATGTTCGGGATAATGAAGAGATAAC 1049
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 15944318995275
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |