Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rutstroemia_20sydowiana_20[genbank_20GCA_5F000812895.1_202014-12-31] 11,777 sequences; 51,994,176 total letters Query= NC_013699.1 Length=5018 Score E Sequences producing significant alignments: (Bits) Value seq1561 150 6e-33 >seq1561 Length=6577 Score = 150 bits (166), Expect = 6e-33 Identities = 209/293 (71%), Gaps = 0/293 (0%) Strand=Plus/Minus Query 367 CATCTGGAACCACAGCAGCTACCGTCTCCCGCGTTCGCGCCCTTTACGACTTCACGCCCT 426 ||||||| || ||||| |||||||| || | || || || | ||| ||| | Sbjct 4693 CATCTGGTACAACAGCCGCTACCGTTTCAAGAGTAAAGGCGCTATTCGATTTCCAAGCTA 4634 Query 427 CGGAACCCGGCGAGTTGGCTTTCCGCAAAGGCGACATTATTGCGGTTCTCGAGTCTGTGT 486 | || || | || || ||| | || || || ||||||||||| | | ||||||| Sbjct 4633 CAGACCCGGATGAATTACAATTCAGAAAGGGTGATATTATTGCGGTAGTTGGTTCTGTGT 4574 Query 487 ACAAGGACTGGTGGAAGGGTTCTCTGCGTGGACAGACCGGCATCTTCCCCCTCAACTATG 546 | ||||||||||||| |||||||| || ||| |||| || ||||| || || || |||| Sbjct 4573 ATAAGGACTGGTGGAGAGGTTCTCTACGAGGAAAGACAGGAATCTTTCCGCTTAATTATG 4514 Query 547 TCGAGAAGCTGCAGGATCCTACCAAGGAGGAGCTCGAGAGAGAAGCTCAGATGGAGGCGG 606 |||||||| || ||| || || | || ||||| | || || || || |||||||| | Sbjct 4513 TCGAGAAGTTGATGGACCCAACGACAGAAGAGCTACAAAGGGAGGCGCAAATGGAGGCAG 4454 Query 607 AAGTCTTTGCGGAGATCAAGAACGTGGAGAAGCTGCTAGCTCTGCTGAGCACT 659 | || ||||| || || ||||| ||||||||| | || | || || || ||| Sbjct 4453 AGGTGTTTGCAGAAATTAAGAATGTGGAGAAGTTACTCACACTTCTTAGTACT 4401 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 15943546032315