Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rutstroemia_20sydowiana_20[genbank_20GCA_5F000812895.1_202014-12-31]
11,777 sequences; 51,994,176 total letters
Query= NC_013699.1
Length=5018
Score E
Sequences producing significant alignments: (Bits) Value
seq1561 150 6e-33
>seq1561
Length=6577
Score = 150 bits (166), Expect = 6e-33
Identities = 209/293 (71%), Gaps = 0/293 (0%)
Strand=Plus/Minus
Query 367 CATCTGGAACCACAGCAGCTACCGTCTCCCGCGTTCGCGCCCTTTACGACTTCACGCCCT 426
||||||| || ||||| |||||||| || | || || || | ||| ||| |
Sbjct 4693 CATCTGGTACAACAGCCGCTACCGTTTCAAGAGTAAAGGCGCTATTCGATTTCCAAGCTA 4634
Query 427 CGGAACCCGGCGAGTTGGCTTTCCGCAAAGGCGACATTATTGCGGTTCTCGAGTCTGTGT 486
| || || | || || ||| | || || || ||||||||||| | | |||||||
Sbjct 4633 CAGACCCGGATGAATTACAATTCAGAAAGGGTGATATTATTGCGGTAGTTGGTTCTGTGT 4574
Query 487 ACAAGGACTGGTGGAAGGGTTCTCTGCGTGGACAGACCGGCATCTTCCCCCTCAACTATG 546
| ||||||||||||| |||||||| || ||| |||| || ||||| || || || ||||
Sbjct 4573 ATAAGGACTGGTGGAGAGGTTCTCTACGAGGAAAGACAGGAATCTTTCCGCTTAATTATG 4514
Query 547 TCGAGAAGCTGCAGGATCCTACCAAGGAGGAGCTCGAGAGAGAAGCTCAGATGGAGGCGG 606
|||||||| || ||| || || | || ||||| | || || || || |||||||| |
Sbjct 4513 TCGAGAAGTTGATGGACCCAACGACAGAAGAGCTACAAAGGGAGGCGCAAATGGAGGCAG 4454
Query 607 AAGTCTTTGCGGAGATCAAGAACGTGGAGAAGCTGCTAGCTCTGCTGAGCACT 659
| || ||||| || || ||||| ||||||||| | || | || || || |||
Sbjct 4453 AGGTGTTTGCAGAAATTAAGAATGTGGAGAAGTTACTCACACTTCTTAGTACT 4401
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 15943546032315
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |