Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sarocladium_20oryzae_20[genbank_20GCA_5F001605845.1_202016-04-01] 5,856 sequences; 32,778,109 total letters Query= NC_013699.1 Length=5018 Score E Sequences producing significant alignments: (Bits) Value seq1406 210 7e-51 >seq1406 Length=42821 Score = 210 bits (232), Expect = 7e-51 Identities = 330/464 (71%), Gaps = 20/464 (4%) Strand=Plus/Minus Query 205 TCACGGACTCGGACCGCCAGAAGGAAGAGGAGGAGCTACAGATGGCGCTG--GC--ACTC 260 |||||||| |||||| |||||||||||||| ||||| |||||||||||| || | || Sbjct 557 TCACGGACCTGGACCGGCAGAAGGAAGAGGATGAGCTGCAGATGGCGCTGAAGCTGAGTC 498 Query 261 TCC--GTCAAGGAAAGCGGGACCGAGCCATCCGCCGCCAGGTCCAACCAGCCGCAAGCAA 318 | | | | |||| ||| || ||||| | |||| || | | |||| ||| Sbjct 497 TGCAGGACGAGGAGAGCAAGA---AGCCAGCTGCCGGAGGGGGGAGCT---CGCAGGCAG 444 Query 319 AAGCCCCACAACAATCCGCCCCGGAA-CAAGAGCAGCATCAAGCTATTGCATCTGGAACC 377 | || | ||| | ||| | || |||| || || || | | || ||| Sbjct 443 GA--CCTAGTGG----CGCACAGGAGGCCAGCCCAGC-TCCTGCCGTTCCGGCGGGTACC 391 Query 378 ACAGCAGCTACCGTCTCCCGCGTTCGCGCCCTTTACGACTTCACGCCCTCGGAACCCGGC 437 || || || || ||| |||||| ||||| || ||||| ||||| ||||| || || || Sbjct 390 ACGGCCGCAACGGTCAGCCGCGTGCGCGCTCTCTACGATTTCACACCCTCCGAGCCTGGA 331 Query 438 GAGTTGGCTTTCCGCAAAGGCGACATTATTGCGGTTCTCGAGTCTGTGTACAAGGACTGG 497 ||| ||| ||| ||||| | ||||| || |||||| ||||||||||||||| Sbjct 330 GAGCTGGAGTTCAAGCGTGGCGATGTGATTGCCGTCCTCGAGAGCGTGTACAAGGACTGG 271 Query 498 TGGAAGGGTTCTCTGCGTGGACAGACCGGCATCTTCCCCCTCAACTATGTCGAGAAGCTG 557 |||| || || || || |||||||||||||||| |||||||| |||||||||||| Sbjct 270 TGGAGAGGCTCGCTCAAGGGCAAGACCGGCATCTTCCCGCTCAACTACGTCGAGAAGCTG 211 Query 558 CAGGATCCTACCAAGGAGGAGCTCGAGAGAGAAGCTCAGATGGAGGCGGAAGTCTTTGCG 617 || || || ||| ||||| || | || || ||||||||||| || || || || Sbjct 210 ACTGACCCGACGCCGGACGAGCTACAGCGCGAGGCGCAGATGGAGGCTGAGGTGTTCGCT 151 Query 618 GAGATCAAGAACGTGGAGAAGCTGCTAGCTCTGCTGAGCACTAG 661 ||||| |||||||||||||||||||| || |||||||||| || Sbjct 150 GAGATTAAGAACGTGGAGAAGCTGCTGACTTTGCTGAGCACGAG 107 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 15944578684320