Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sarocladium_20oryzae_20[genbank_20GCA_5F001972265.1_202016-12-09] 47 sequences; 32,403,370 total letters Query= NC_013699.1 Length=5018 Score E Sequences producing significant alignments: (Bits) Value seq3 203 1e-48 >seq3 Length=3685789 Score = 203 bits (224), Expect = 1e-48 Identities = 219/290 (76%), Gaps = 0/290 (0%) Strand=Plus/Minus Query 372 GGAACCACAGCAGCTACCGTCTCCCGCGTTCGCGCCCTTTACGACTTCACGCCCTCGGAA 431 || ||||| || || || ||| |||||| ||||| || ||||| ||||| ||||| || Sbjct 3156073 GGTACCACGGCCGCAACGGTCAGCCGCGTGCGCGCTCTCTACGATTTCACACCCTCCGAG 3156014 Query 432 CCCGGCGAGTTGGCTTTCCGCAAAGGCGACATTATTGCGGTTCTCGAGTCTGTGTACAAG 491 || || ||| ||| ||| ||||| | ||||| || |||||| ||||| ||| Sbjct 3156013 CCTGGAGAGCTGGAGTTCAAGCGTGGCGATGTGATTGCCGTCCTCGAGAGCGTGTATAAG 3155954 Query 492 GACTGGTGGAAGGGTTCTCTGCGTGGACAGACCGGCATCTTCCCCCTCAACTATGTCGAG 551 |||||||||| || || || || |||||||||||||||| |||||||| |||||| Sbjct 3155953 GACTGGTGGAGAGGCTCGCTCAAGGGCAAGACCGGCATCTTCCCGCTCAACTACGTCGAG 3155894 Query 552 AAGCTGCAGGATCCTACCAAGGAGGAGCTCGAGAGAGAAGCTCAGATGGAGGCGGAAGTC 611 |||||| || || || ||| ||||| || | || || ||||||||||| || || Sbjct 3155893 AAGCTGACTGACCCGACGCCGGACGAGCTACAGCGCGAGGCGCAGATGGAGGCCGAGGTG 3155834 Query 612 TTTGCGGAGATCAAGAACGTGGAGAAGCTGCTAGCTCTGCTGAGCACTAG 661 || || ||||| |||||||||||||||||||| || |||||||||| || Sbjct 3155833 TTCGCTGAGATTAAGAACGTGGAGAAGCTGCTGACTTTGCTGAGCACGAG 3155784 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 15945591802965