Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sclerotinia_20homoeocarpa_20[genbank_20GCA_5F001465945.1_202015-12-
14] 231 sequences; 42,266,283 total letters
Query= NC_013699.1
Length=5018
Score E
Sequences producing significant alignments: (Bits) Value
seq180 159 1e-35
>seq180
Length=426322
Score = 159 bits (176), Expect = 1e-35
Identities = 211/293 (72%), Gaps = 0/293 (0%)
Strand=Plus/Minus
Query 367 CATCTGGAACCACAGCAGCTACCGTCTCCCGCGTTCGCGCCCTTTACGACTTCACGCCCT 426
|||| || || || || |||||||| || || ||| | || |||||||||||| ||
Sbjct 21792 CATCCGGCACAACGGCTGCTACCGTTTCACGAGTTAGAGCGCTTTACGACTTCCAAGCCA 21733
Query 427 CGGAACCCGGCGAGTTGGCTTTCCGCAAAGGCGACATTATTGCGGTTCTCGAGTCTGTGT 486
| || | | |||||| ||||| ||||| || ||||| | || | | || ||||
Sbjct 21732 CCGATGCTGACGAGTTACAATTCCGGAAAGGAGATATTATCACAGTGGTAGGCTCAGTGT 21673
Query 487 ACAAGGACTGGTGGAAGGGTTCTCTGCGTGGACAGACCGGCATCTTCCCCCTCAACTATG 546
|||| || ||||||| || || | || || || || || || ||||| | || || |
Sbjct 21672 ACAAAGATTGGTGGAGAGGATCGTTACGAGGCCAAACGGGGATTTTCCCTTTAAATTACG 21613
Query 547 TCGAGAAGCTGCAGGATCCTACCAAGGAGGAGCTCGAGAGAGAAGCTCAGATGGAGGCGG 606
| |||||| || ||||||||| ||| || || || | |||||||| ||||| || |
Sbjct 21612 TTGAGAAGTTGATGGATCCTACACCGGAAGAACTACAGCGGGAAGCTCAAATGGAAGCCG 21553
Query 607 AAGTCTTTGCGGAGATCAAGAACGTGGAGAAGCTGCTAGCTCTGCTGAGCACT 659
|||| || || |||||||||||||| |||||||| || | || ||||| |||
Sbjct 21552 AAGTTTTCGCCGAGATCAAGAACGTAGAGAAGCTACTCACGCTACTGAGTACT 21500
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 15945559712445
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |