Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sclerotinia_20homoeocarpa_20[genbank_20GCA_5F002242865.1_202017-08- 07] 3,875 sequences; 36,396,316 total letters Query= NC_013699.1 Length=5018 Score E Sequences producing significant alignments: (Bits) Value seq361 149 2e-32 >seq361 Length=22244 Score = 149 bits (164), Expect = 2e-32 Identities = 196/272 (72%), Gaps = 0/272 (0%) Strand=Plus/Plus Query 367 CATCTGGAACCACAGCAGCTACCGTCTCCCGCGTTCGCGCCCTTTACGACTTCACGCCCT 426 |||| || || || || || ||||| || || ||| | || |||||||| ||| || Sbjct 19482 CATCCGGCACAACGGCTGCAACCGTTTCGCGAGTTAGGGCGCTTTACGATTTCCAAGCCA 19541 Query 427 CGGAACCCGGCGAGTTGGCTTTCCGCAAAGGCGACATTATTGCGGTTCTCGAGTCTGTGT 486 | || | | ||||||| ||||| ||||| || ||||| | || | | || |||| Sbjct 19542 CTGATGCTGACGAGTTGCAATTCCGAAAAGGAGATATTATCACAGTGGTAGGATCAGTGT 19601 Query 487 ACAAGGACTGGTGGAAGGGTTCTCTGCGTGGACAGACCGGCATCTTCCCCCTCAACTATG 546 |||| || ||||||| ||||| | || || || || || || ||||| || || || | Sbjct 19602 ACAAAGATTGGTGGAGAGGTTCGATACGAGGCCAAACGGGAATTTTCCCTCTAAATTACG 19661 Query 547 TCGAGAAGCTGCAGGATCCTACCAAGGAGGAGCTCGAGAGAGAAGCTCAGATGGAGGCGG 606 |||||||| || ||||||||| ||| || | | | |||||||| ||||| || | Sbjct 19662 TCGAGAAGTTGATGGATCCTACACCGGAAGAATTACAACGGGAAGCTCAAATGGAAGCCG 19721 Query 607 AAGTCTTTGCGGAGATCAAGAACGTGGAGAAG 638 |||| || || |||||||||||||| |||||| Sbjct 19722 AAGTTTTCGCCGAGATCAAGAACGTAGAGAAG 19753 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 15944924180625