Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sclerotinia_20homoeocarpa_20[genbank_20GCA_5F002242865.1_202017-08-
07] 3,875 sequences; 36,396,316 total letters
Query= NC_013699.1
Length=5018
Score E
Sequences producing significant alignments: (Bits) Value
seq361 149 2e-32
>seq361
Length=22244
Score = 149 bits (164), Expect = 2e-32
Identities = 196/272 (72%), Gaps = 0/272 (0%)
Strand=Plus/Plus
Query 367 CATCTGGAACCACAGCAGCTACCGTCTCCCGCGTTCGCGCCCTTTACGACTTCACGCCCT 426
|||| || || || || || ||||| || || ||| | || |||||||| ||| ||
Sbjct 19482 CATCCGGCACAACGGCTGCAACCGTTTCGCGAGTTAGGGCGCTTTACGATTTCCAAGCCA 19541
Query 427 CGGAACCCGGCGAGTTGGCTTTCCGCAAAGGCGACATTATTGCGGTTCTCGAGTCTGTGT 486
| || | | ||||||| ||||| ||||| || ||||| | || | | || ||||
Sbjct 19542 CTGATGCTGACGAGTTGCAATTCCGAAAAGGAGATATTATCACAGTGGTAGGATCAGTGT 19601
Query 487 ACAAGGACTGGTGGAAGGGTTCTCTGCGTGGACAGACCGGCATCTTCCCCCTCAACTATG 546
|||| || ||||||| ||||| | || || || || || || ||||| || || || |
Sbjct 19602 ACAAAGATTGGTGGAGAGGTTCGATACGAGGCCAAACGGGAATTTTCCCTCTAAATTACG 19661
Query 547 TCGAGAAGCTGCAGGATCCTACCAAGGAGGAGCTCGAGAGAGAAGCTCAGATGGAGGCGG 606
|||||||| || ||||||||| ||| || | | | |||||||| ||||| || |
Sbjct 19662 TCGAGAAGTTGATGGATCCTACACCGGAAGAATTACAACGGGAAGCTCAAATGGAAGCCG 19721
Query 607 AAGTCTTTGCGGAGATCAAGAACGTGGAGAAG 638
|||| || || |||||||||||||| ||||||
Sbjct 19722 AAGTTTTCGCCGAGATCAAGAACGTAGAGAAG 19753
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 15944924180625
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |