Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sclerotinia_20homoeocarpa_20[genbank_20GCA_5F002242995.1_202017-08-
07] 4,289 sequences; 35,887,177 total letters
Query= NC_013699.1
Length=5018
Score E
Sequences producing significant alignments: (Bits) Value
seq1247 159 1e-35
>seq1247
Length=14769
Score = 159 bits (176), Expect = 1e-35
Identities = 211/293 (72%), Gaps = 0/293 (0%)
Strand=Plus/Minus
Query 367 CATCTGGAACCACAGCAGCTACCGTCTCCCGCGTTCGCGCCCTTTACGACTTCACGCCCT 426
|||| || || || || |||||||| || || ||| | || |||||||||||| ||
Sbjct 2431 CATCCGGCACAACGGCTGCTACCGTTTCACGAGTTAGAGCGCTTTACGACTTCCAAGCCA 2372
Query 427 CGGAACCCGGCGAGTTGGCTTTCCGCAAAGGCGACATTATTGCGGTTCTCGAGTCTGTGT 486
| || | | |||||| ||||| ||||| || ||||| | || | | || ||||
Sbjct 2371 CCGATGCTGACGAGTTACAATTCCGGAAAGGAGATATTATCACAGTGGTAGGCTCAGTGT 2312
Query 487 ACAAGGACTGGTGGAAGGGTTCTCTGCGTGGACAGACCGGCATCTTCCCCCTCAACTATG 546
|||| || ||||||| || || | || || || || || || ||||| | || || |
Sbjct 2311 ACAAAGATTGGTGGAGAGGATCGTTACGAGGCCAAACGGGGATTTTCCCTTTAAATTACG 2252
Query 547 TCGAGAAGCTGCAGGATCCTACCAAGGAGGAGCTCGAGAGAGAAGCTCAGATGGAGGCGG 606
| |||||| || ||||||||| ||| || || || | |||||||| ||||| || |
Sbjct 2251 TTGAGAAGTTGATGGATCCTACACCGGAAGAACTACAGCGGGAAGCTCAAATGGAAGCCG 2192
Query 607 AAGTCTTTGCGGAGATCAAGAACGTGGAGAAGCTGCTAGCTCTGCTGAGCACT 659
|||| || || |||||||||||||| |||||||| || | || ||||| |||
Sbjct 2191 AAGTTTTCGCCGAGATCAAGAACGTAGAGAAGCTACTCACGCTACTGAGTACT 2139
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 15944851976955
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |