Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sporothrix_20pallida_20[genbank_20GCA_5F000710705.2_202016-02-09] 432 sequences; 37,827,857 total letters Query= NC_013699.1 Length=5018 Score E Sequences producing significant alignments: (Bits) Value seq413 181 3e-42 >seq413 Length=153188 Score = 181 bits (200), Expect = 3e-42 Identities = 211/285 (74%), Gaps = 0/285 (0%) Strand=Plus/Minus Query 372 GGAACCACAGCAGCTACCGTCTCCCGCGTTCGCGCCCTTTACGACTTCACGCCCTCGGAA 431 || || || ||||| ||||| |||||||| ||||| || | ||||| | ||||||| Sbjct 131817 GGCACGACGGCAGCGACCGTGTCCCGCGTGCGCGCGCTCTTTGACTTTGCCGCCTCGGAG 131758 Query 432 CCCGGCGAGTTGGCTTTCCGCAAAGGCGACATTATTGCGGTTCTCGAGTCTGTGTACAAG 491 | | |||| | | |||| || ||||| ||||| || || |||||||| || ||| Sbjct 131757 CAGGACGAGCTCGATTTCAAGAAGGGCGATATTATCGCCGTGCTCGAGTCCGTCTACCGC 131698 Query 492 GACTGGTGGAAGGGTTCTCTGCGTGGACAGACCGGCATCTTCCCCCTCAACTATGTCGAG 551 ||||||||| || || || || | || ||||||||||| |||||||| |||||| Sbjct 131697 GACTGGTGGCGAGGCTCGCTCAAGGGCCGCACAGGCATCTTCCCGCTCAACTACGTCGAG 131638 Query 552 AAGCTGCAGGATCCTACCAAGGAGGAGCTCGAGAGAGAAGCTCAGATGGAGGCGGAAGTC 611 | ||| || || ||| || ||||| || | || || ||||||||||| || || Sbjct 131637 ATCCTGGCTGACCCGACCCCCGATGAGCTGCAGCGCGAGGCGCAGATGGAGGCCGAGGTG 131578 Query 612 TTTGCGGAGATCAAGAACGTGGAGAAGCTGCTAGCTCTGCTGAGC 656 ||||| |||||||||||||| ||||||||||| | ||||||||| Sbjct 131577 TTTGCCGAGATCAAGAACGTCGAGAAGCTGCTGACCCTGCTGAGC 131533 Score = 104 bits (114), Expect = 7e-19 Identities = 160/223 (72%), Gaps = 14/223 (6%) Strand=Plus/Minus Query 702 CTGTACCACAAGACAGTGTCGATACGGCCGAAGTTGATCGAGCTCATTGGCAAGTATTCG 761 || |||||| ||||| | |||| ||||||||| ||||| |||| || | ||||| || Sbjct 131432 CTCTACCACCAGACACTCGCGATCCGGCCGAAGCTGATCAAGCTGATCGAGAAGTACTCA 131373 Query 762 CAAAAGAAGGGTAAGTGGAATCTTTTACGCG--AATTTG-TGT------GTTGGCCACTG 812 || |||||||||||| | ||| | || | | ||| || || ||||| Sbjct 131372 CAGAAGAAGGGTAAGCAG--TCTACT-CGTGGTACTTTCCTGCTTAACAGTACCCCACTA 131316 Query 813 ATCGTGTTCCAGATGATTTCACGCAGCTCAACGAGAAGTTCATCAAGGCACGCCGCGACT 872 | ||||| || ||||||||||||||||| |||||||||||||| ||||| |||| Sbjct 131315 ACAACC--CCAGACGACTTCACGCAGCTCAACGAAAAGTTCATCAAGGCCCGCCGTGACT 131258 Query 873 ACGAAACCCTCCTTGAAGCCTCGATGTCGCAACCAGCGCAGCC 915 |||| |||| || ||| | || ||||| || || | ||||| Sbjct 131257 ACGAGGCCCTGCTCGAATCGTCCATGTCCCACCCGCCCCAGCC 131215 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 15945524657040