Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Stemphylium_20lycopersici_20[genbank_20GCA_5F001191545.1_202015-08-
03] 414 sequences; 35,173,254 total letters
Query= NC_013699.1
Length=5018
Score E
Sequences producing significant alignments: (Bits) Value
seq333 403 6e-109
>seq333
Length=639366
Score = 403 bits (446), Expect = 6e-109
Identities = 647/920 (70%), Gaps = 26/920 (3%)
Strand=Plus/Plus
Query 2 GCAGATCAAGGCAAAGATCCTCGAGCGTATGGGTGAATGGACGGAGATGTTCGCCAGTAA 61
|||| ||||||| ||||| || ||||| ||||| |||||| | || ||||||||| | |
Sbjct 284088 GCAGGTCAAGGCTAAGATACTGGAGCGCATGGGAGAATGGTCCGACATGTTCGCCCGAGA 284147
Query 62 CCCTGATCTTGGCATCATGGAGCAGGCCTATATGAGGCTTAAGACACAAAGTGCGTGTGA 121
|| || || ||||||||| || || |||| ||| ||| |||| ||| ||| |
Sbjct 284148 TCCCGACCTGGGCATCATGTCTGGCGCTTACATGAAGCTGAAGTCACAGAGTACGTCGCA 284207
Query 122 TCAACTCTGGTTCGTTGGGAGCACTGACCAACGTGTTGTAGACCCTAACCTGCGACCTCC 181
| || | ||| || ||| || | ||||||| ||||| || | ||
Sbjct 284208 CCCACA-TACAGCGTGTGGCTTGCTGCTCACAAAGCA-TAGACCCCAACCTTCGCGCCCC 284265
Query 182 GTCGAAACCTCAGAAGACCCAGATCACGGACTCGGACCGCCAGAAGGAAGAGGAGGAGCT 241
||||| || |||||||| |||||| | ||| || |||||||||||||| || |||||
Sbjct 284266 CTCGAAGCCACAGAAGACGCAGATCTCCGACGTCGATCGCCAGAAGGAAGAAGAAGAGCT 284325
Query 242 ACAGATGGCGCTGGCACTCTCCGTCAAGGAAAGC---GGGACCGAGCCATCCGCCGCCAG 298
||||||||||| || | || | | || | || | | || | || ||||
Sbjct 284326 CCAGATGGCGCTTGCCATGTCGATAAGAGAGTCCAAAGGCGCTGCCCCGACGGCTGCCAA 284385
Query 299 GTCCAACCAGCCGCAAGCAAAAGCCCCACAACAATCCGCCCCGGAACAAGAGCAGCA--- 355
|||||| || || ||||| || | | | | || || ||| |||||| |
Sbjct 284386 ATCCAACACTCCTCA-GCAAA-GCGGCTCTGCCCCCAGCGCCC-AACCAGAGCAACCAGC 284442
Query 356 TCAAGCTATTGCATCTGGAACCACAGCAGCTACCGTCTCCCGCGTTCGCGCCCTTTACGA 415
||| | | | || || ||||| || || |||||||| | || ||||| || | |||
Sbjct 284443 TCAGCCCGTACCTTCAGGTACCACCGCTGCGACCGTCTCAAGAGTACGCGCGCTCTTCGA 284502
Query 416 CTTCACGCCCTCGGAACCCGGCGAGTTGGCTTTCCGCAAAGGCGACATTATTGCGGTTCT 475
||| ||| || ||||| || || || ||||| || |||||||| || || || ||
Sbjct 284503 TTTCCAGCCGTCCGAACCAGGTGAATTACAGTTCCGGAAGGGCGACATCATCGCCGTCCT 284562
Query 476 CGAGTCTGTGTACAAGGACTGGTGGAAGGGTTCTCTGCGTGGACAGACCGGCATCTTCCC 535
||| || || |||||||||||||||||||| || ||||| || || || |||||||||||
Sbjct 284563 CGAATCCGTATACAAGGACTGGTGGAAGGGGTCCCTGCGCGGGCAAACGGGCATCTTCCC 284622
Query 536 CCTCAACTATGTCGAGAAGCTGCAGGATCCTACCAAGGAGGAGCTCGAGAGAGAAGCTCA 595
|||||||| |||||||| |||||||||||||| |||||||||||||| || || ||
Sbjct 284623 ACTCAACTACGTCGAGAAACTGCAGGATCCTACGCGAGAGGAGCTCGAGAGGGAGGCACA 284682
Query 596 GATGGAGGCGGAAGTCTTTGCGGAGATCAAGAACGTGGAGAAGCTGCTAGCTCTGCTGAG 655
|| || || || || |||||| | || | |||||||||||||||||| |||||||||||
Sbjct 284683 GAACGAAGCCGAGGTGTTTGCGCAAATTAGGAACGTGGAGAAGCTGCTTGCTCTGCTGAG 284742
Query 656 CACTAGTTCG------AGTGCC---GACGCTAGGGACAATGAGGAGATCACTTCGCTGTA 706
||||| ||| | ||| || ||| |||||||||| ||||| || ||| ||
Sbjct 284743 TACTAGCTCGCAACCAGGCGCCGGTGATGCTCGGGACAATGAAGAGATTACAGAGCTCTA 284802
Query 707 CCACAAGACAGTGTCGATACGGCCGAAGTTGATCGAGCTCATTGGCAAGTATTCGCAAAA 766
|||| ||| || | || | || ||||||||||||||||| || ||||| || || ||
Sbjct 284803 CCACTCGACCTTGGCTATCAGACCAAAGTTGATCGAGCTCATCGGAAAGTACTCACAGAA 284862
Query 767 GAAGGGTAAGTGGAATCTTTTACGCGAATTTGTGTGTTGGCCACTGATCGTGTTCCAGAT 826
||| |||| | || || | | | | || | | | | |||| ||||
Sbjct 284863 GAAAGGTACG----ATGGTTCCCTCCGAAAGCTTCACAGGAAATTAACCATGTT--AGAT 284916
Query 827 GATTTCACGCAGCTCAACGAGAAGTTCATCAAGGCACGCCGCGACTACGAAACCCTCCTT 886
|| || || ||||| ||||||||||| |||||||| || | ||||||||| | | ||
Sbjct 284917 GACTTTACACAGCTGAACGAGAAGTTTATCAAGGCTCGTAGAGACTACGAATCAATGCTG 284976
Query 887 GAAGCCTCGATGTCGCAACC 906
||||| || |||||||| ||
Sbjct 284977 GAAGCATCAATGTCGCAGCC 284996
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 15945527796330
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |