Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stemphylium_20lycopersici_20[genbank_20GCA_5F001191545.1_202015-08- 03] 414 sequences; 35,173,254 total letters Query= NC_013699.1 Length=5018 Score E Sequences producing significant alignments: (Bits) Value seq333 403 6e-109 >seq333 Length=639366 Score = 403 bits (446), Expect = 6e-109 Identities = 647/920 (70%), Gaps = 26/920 (3%) Strand=Plus/Plus Query 2 GCAGATCAAGGCAAAGATCCTCGAGCGTATGGGTGAATGGACGGAGATGTTCGCCAGTAA 61 |||| ||||||| ||||| || ||||| ||||| |||||| | || ||||||||| | | Sbjct 284088 GCAGGTCAAGGCTAAGATACTGGAGCGCATGGGAGAATGGTCCGACATGTTCGCCCGAGA 284147 Query 62 CCCTGATCTTGGCATCATGGAGCAGGCCTATATGAGGCTTAAGACACAAAGTGCGTGTGA 121 || || || ||||||||| || || |||| ||| ||| |||| ||| ||| | Sbjct 284148 TCCCGACCTGGGCATCATGTCTGGCGCTTACATGAAGCTGAAGTCACAGAGTACGTCGCA 284207 Query 122 TCAACTCTGGTTCGTTGGGAGCACTGACCAACGTGTTGTAGACCCTAACCTGCGACCTCC 181 | || | ||| || ||| || | ||||||| ||||| || | || Sbjct 284208 CCCACA-TACAGCGTGTGGCTTGCTGCTCACAAAGCA-TAGACCCCAACCTTCGCGCCCC 284265 Query 182 GTCGAAACCTCAGAAGACCCAGATCACGGACTCGGACCGCCAGAAGGAAGAGGAGGAGCT 241 ||||| || |||||||| |||||| | ||| || |||||||||||||| || ||||| Sbjct 284266 CTCGAAGCCACAGAAGACGCAGATCTCCGACGTCGATCGCCAGAAGGAAGAAGAAGAGCT 284325 Query 242 ACAGATGGCGCTGGCACTCTCCGTCAAGGAAAGC---GGGACCGAGCCATCCGCCGCCAG 298 ||||||||||| || | || | | || | || | | || | || |||| Sbjct 284326 CCAGATGGCGCTTGCCATGTCGATAAGAGAGTCCAAAGGCGCTGCCCCGACGGCTGCCAA 284385 Query 299 GTCCAACCAGCCGCAAGCAAAAGCCCCACAACAATCCGCCCCGGAACAAGAGCAGCA--- 355 |||||| || || ||||| || | | | | || || ||| |||||| | Sbjct 284386 ATCCAACACTCCTCA-GCAAA-GCGGCTCTGCCCCCAGCGCCC-AACCAGAGCAACCAGC 284442 Query 356 TCAAGCTATTGCATCTGGAACCACAGCAGCTACCGTCTCCCGCGTTCGCGCCCTTTACGA 415 ||| | | | || || ||||| || || |||||||| | || ||||| || | ||| Sbjct 284443 TCAGCCCGTACCTTCAGGTACCACCGCTGCGACCGTCTCAAGAGTACGCGCGCTCTTCGA 284502 Query 416 CTTCACGCCCTCGGAACCCGGCGAGTTGGCTTTCCGCAAAGGCGACATTATTGCGGTTCT 475 ||| ||| || ||||| || || || ||||| || |||||||| || || || || Sbjct 284503 TTTCCAGCCGTCCGAACCAGGTGAATTACAGTTCCGGAAGGGCGACATCATCGCCGTCCT 284562 Query 476 CGAGTCTGTGTACAAGGACTGGTGGAAGGGTTCTCTGCGTGGACAGACCGGCATCTTCCC 535 ||| || || |||||||||||||||||||| || ||||| || || || ||||||||||| Sbjct 284563 CGAATCCGTATACAAGGACTGGTGGAAGGGGTCCCTGCGCGGGCAAACGGGCATCTTCCC 284622 Query 536 CCTCAACTATGTCGAGAAGCTGCAGGATCCTACCAAGGAGGAGCTCGAGAGAGAAGCTCA 595 |||||||| |||||||| |||||||||||||| |||||||||||||| || || || Sbjct 284623 ACTCAACTACGTCGAGAAACTGCAGGATCCTACGCGAGAGGAGCTCGAGAGGGAGGCACA 284682 Query 596 GATGGAGGCGGAAGTCTTTGCGGAGATCAAGAACGTGGAGAAGCTGCTAGCTCTGCTGAG 655 || || || || || |||||| | || | |||||||||||||||||| ||||||||||| Sbjct 284683 GAACGAAGCCGAGGTGTTTGCGCAAATTAGGAACGTGGAGAAGCTGCTTGCTCTGCTGAG 284742 Query 656 CACTAGTTCG------AGTGCC---GACGCTAGGGACAATGAGGAGATCACTTCGCTGTA 706 ||||| ||| | ||| || ||| |||||||||| ||||| || ||| || Sbjct 284743 TACTAGCTCGCAACCAGGCGCCGGTGATGCTCGGGACAATGAAGAGATTACAGAGCTCTA 284802 Query 707 CCACAAGACAGTGTCGATACGGCCGAAGTTGATCGAGCTCATTGGCAAGTATTCGCAAAA 766 |||| ||| || | || | || ||||||||||||||||| || ||||| || || || Sbjct 284803 CCACTCGACCTTGGCTATCAGACCAAAGTTGATCGAGCTCATCGGAAAGTACTCACAGAA 284862 Query 767 GAAGGGTAAGTGGAATCTTTTACGCGAATTTGTGTGTTGGCCACTGATCGTGTTCCAGAT 826 ||| |||| | || || | | | | || | | | | |||| |||| Sbjct 284863 GAAAGGTACG----ATGGTTCCCTCCGAAAGCTTCACAGGAAATTAACCATGTT--AGAT 284916 Query 827 GATTTCACGCAGCTCAACGAGAAGTTCATCAAGGCACGCCGCGACTACGAAACCCTCCTT 886 || || || ||||| ||||||||||| |||||||| || | ||||||||| | | || Sbjct 284917 GACTTTACACAGCTGAACGAGAAGTTTATCAAGGCTCGTAGAGACTACGAATCAATGCTG 284976 Query 887 GAAGCCTCGATGTCGCAACC 906 ||||| || |||||||| || Sbjct 284977 GAAGCATCAATGTCGCAGCC 284996 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 15945527796330