Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Thermoascus_20crustaceus_20[genbank_20GCA_5F001599835.1_202016-03- 01] 33 sequences; 31,644,316 total letters Query= NC_013699.1 Length=5018 Score E Sequences producing significant alignments: (Bits) Value seq2 304 4e-79 >seq2 Length=4789688 Score = 304 bits (336), Expect = 4e-79 Identities = 640/939 (68%), Gaps = 48/939 (5%) Strand=Plus/Plus Query 2 GCAGATCAAGGCAAAGATCCTCGAGCGTATGGGTGAATGGACGGAGATGTTCGCCAGTAA 61 |||| | ||| | ||||| | || || |||| ||||||| || ||||| | || || Sbjct 596244 GCAGGTTAAGTCGAAGATATTGGAACGCATGGAAGAATGGAGTGAAATGTTTTCGAGCAA 596303 Query 62 CCCTGATCTTGGCATCATGGAGCAGGCCTATATGAGGCTTAAGACACAAAGTGCGTGT-- 119 |||||| |||| ||||||||||||||||| |||| || ||||| || |||| | | Sbjct 596304 CCCTGAATTTGGAATCATGGAGCAGGCCTACATGAAACTGAAGACTCAGAGTGAGAATCC 596363 Query 120 ---GATCAACTCTGGT-TCGTTGGGAGCACTGACCAACGTGTTGT--AGACCCTAACCTG 173 | ||| | || | || | | | | | | || | || |||||| ||||| Sbjct 596364 CAGGCGCAAGAGTTGTCTAGTAG--ATC-CAGGCTAATCTCTTTCTCAGACCCAAACCTT 596420 Query 174 CGACCTCCGTCGAAACCTCAGAAGACCCAGATCACGGACTCGGACCGCCAGAAGGAAGAG 233 | |||||| ||||||||| ||| |||||||||||| ||||| |||||||||||| Sbjct 596421 CAACCTCCCTCGAAACCTACGAAACGCCAGATCACGGAGCTTGACCGGCAGAAGGAAGAG 596480 Query 234 GAGGAGCTACAGATGGCGCTGGCACTCTCCGTCAAGGAAA---GCGGGACCGAGCCATC- 289 |||||||| |||||||| || |||||||| | ||||| | ||| || | || || Sbjct 596481 GAGGAGCTCCAGATGGCACTTGCACTCTCGATAAAGGACAAGGGCGCTACGGCCCCGTCT 596540 Query 290 -CGCCGCCAGGTCCAACCA--GCCGCA--------AGCAAAAGCCCCACA---ACAATCC 335 | | ||| || ||| | ||| | ||| ||| |||| |||| || Sbjct 596541 ACACAGCC---TCAAACTACCGCCCCTTCCAGTTCAGCGCCAGCTACACAGGAACAAGCC 596597 Query 336 GCCCCGGAACAAG-AGCAGCATCAAGCTATTGCATCTGGAACCACAGCAGCTACCGTCTC 394 || || || | || | || | | || | | || || || || ||||| || || Sbjct 596598 GCACCCTCTCAGGTAGTTCCTTCTGG-TGTTCCTCCAGGTACAACCGCTGCTACTGTTTC 596656 Query 395 CCGCGTTCGCGCCCTTTACGACTTCACGCCCTCGGAACCCGGCGAGTTGGCTTTCCGCAA 454 || || | || || | || ||| || || || ||||||||| | ||||| || Sbjct 596657 GCGAGTGAGAGCACTGTTTGATTTCCAACCTTCCGAGCCCGGCGAGCTCCAATTCCGAAA 596716 Query 455 AGGCGACATTATTGCGGTTCTCGAGTCTGTGTACAAGGACTGGTGGAAGGGTTCTCTGCG 514 ||||| || ||||| || || || || |||||||| ||||||||||| || || ||| | Sbjct 596717 GGGCGATATAATTGCCGTCCTGGAATCCGTGTACAAAGACTGGTGGAAAGGCTCGCTGAG 596776 Query 515 TGGACAGACCGGCATCTTCCCCCTCAACTATGTCGAGAAGCTGCAGGATCCTACCAAGGA 574 || ||||| || || ||||| || ||||||||||||||||| | || ||||| ||| Sbjct 596777 AGGGCAGACTGGAATTTTCCCGCTAAACTATGTCGAGAAGCTCCCCGACCCTACGCCGGA 596836 Query 575 GGAGCTCGAGAGAGAAGCTCAGATGGAGGCGGAAGTCTTTGCGGAGATCAAGAACGTGGA 634 || || || | ||||||||||||||||| ||||| |||| | ||||||||||| || Sbjct 596837 AGAACTGCAGCGGGAAGCTCAGATGGAGGCAGAAGTATTTGGACAAATCAAGAACGTTGA 596896 Query 635 GAAGCTGCTAGCTCTGCTGAGCACT---AGTTCGAGTGC-CGACGCTAGGGACAATGAGG 690 ||| || | | || ||||||||| |||||| | || ||| ||| ||||| | Sbjct 596897 GAAATTGTTGACGCTTCTGAGCACTAGCAGTTCG-GAGCTTAACGTCCAGGATAATGAAG 596955 Query 691 AGATCACTTCGCTGTACCACAAGACAGTGTCGATACGGCCGAAGTTGATCGAGCTCATTG 750 |||| || | |||||||| ||| | |||| |||||||| | |||||| | || | Sbjct 596956 AGATAACGACTTTGTACCACTCGACGTTAGCGATTCGGCCGAAACTTATCGAGTTGATCG 597015 Query 751 GCAAGTATTCGCAAAAGAAGGGTAAGTGGAATCT---TTTACGCGAATTTGTGTGTTGGC 807 | ||||| ||||| ||||| |||| | | ||| | || || ||| | Sbjct 597016 GAAAGTACTCGCAGAAGAAAGGTA--TATACTCTGAGCCTCCGTCGGGTTCACTGTGGCT 597073 Query 808 CACTGATCGTGTTCCAGATGATTTCACGCAGCTCAACGAGAAGTTCATCAAGGCACGCCG 867 ||| | ||||||||| || || |||||||| || || || ||||| ||||| | Sbjct 597074 CACAAA----CATCCAGATGAATTTACCCAGCTCAATGAAAAATTTATCAAAGCACGAAG 597129 Query 868 CGACTACGAAACCCTCCTTGAAGCCTCGATGTCGCAACC 906 || ||||| | || ||||| || || ||||| || || Sbjct 597130 GGATTACGAGGCTCTGCTTGAGGCATCAATGTCCCATCC 597168 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 15945594244635