Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Thermoascus_20crustaceus_20[genbank_20GCA_5F001599835.1_202016-03-
01] 33 sequences; 31,644,316 total letters
Query= NC_013699.1
Length=5018
Score E
Sequences producing significant alignments: (Bits) Value
seq2 304 4e-79
>seq2
Length=4789688
Score = 304 bits (336), Expect = 4e-79
Identities = 640/939 (68%), Gaps = 48/939 (5%)
Strand=Plus/Plus
Query 2 GCAGATCAAGGCAAAGATCCTCGAGCGTATGGGTGAATGGACGGAGATGTTCGCCAGTAA 61
|||| | ||| | ||||| | || || |||| ||||||| || ||||| | || ||
Sbjct 596244 GCAGGTTAAGTCGAAGATATTGGAACGCATGGAAGAATGGAGTGAAATGTTTTCGAGCAA 596303
Query 62 CCCTGATCTTGGCATCATGGAGCAGGCCTATATGAGGCTTAAGACACAAAGTGCGTGT-- 119
|||||| |||| ||||||||||||||||| |||| || ||||| || |||| | |
Sbjct 596304 CCCTGAATTTGGAATCATGGAGCAGGCCTACATGAAACTGAAGACTCAGAGTGAGAATCC 596363
Query 120 ---GATCAACTCTGGT-TCGTTGGGAGCACTGACCAACGTGTTGT--AGACCCTAACCTG 173
| ||| | || | || | | | | | | || | || |||||| |||||
Sbjct 596364 CAGGCGCAAGAGTTGTCTAGTAG--ATC-CAGGCTAATCTCTTTCTCAGACCCAAACCTT 596420
Query 174 CGACCTCCGTCGAAACCTCAGAAGACCCAGATCACGGACTCGGACCGCCAGAAGGAAGAG 233
| |||||| ||||||||| ||| |||||||||||| ||||| ||||||||||||
Sbjct 596421 CAACCTCCCTCGAAACCTACGAAACGCCAGATCACGGAGCTTGACCGGCAGAAGGAAGAG 596480
Query 234 GAGGAGCTACAGATGGCGCTGGCACTCTCCGTCAAGGAAA---GCGGGACCGAGCCATC- 289
|||||||| |||||||| || |||||||| | ||||| | ||| || | || ||
Sbjct 596481 GAGGAGCTCCAGATGGCACTTGCACTCTCGATAAAGGACAAGGGCGCTACGGCCCCGTCT 596540
Query 290 -CGCCGCCAGGTCCAACCA--GCCGCA--------AGCAAAAGCCCCACA---ACAATCC 335
| | ||| || ||| | ||| | ||| ||| |||| |||| ||
Sbjct 596541 ACACAGCC---TCAAACTACCGCCCCTTCCAGTTCAGCGCCAGCTACACAGGAACAAGCC 596597
Query 336 GCCCCGGAACAAG-AGCAGCATCAAGCTATTGCATCTGGAACCACAGCAGCTACCGTCTC 394
|| || || | || | || | | || | | || || || || ||||| || ||
Sbjct 596598 GCACCCTCTCAGGTAGTTCCTTCTGG-TGTTCCTCCAGGTACAACCGCTGCTACTGTTTC 596656
Query 395 CCGCGTTCGCGCCCTTTACGACTTCACGCCCTCGGAACCCGGCGAGTTGGCTTTCCGCAA 454
|| || | || || | || ||| || || || ||||||||| | ||||| ||
Sbjct 596657 GCGAGTGAGAGCACTGTTTGATTTCCAACCTTCCGAGCCCGGCGAGCTCCAATTCCGAAA 596716
Query 455 AGGCGACATTATTGCGGTTCTCGAGTCTGTGTACAAGGACTGGTGGAAGGGTTCTCTGCG 514
||||| || ||||| || || || || |||||||| ||||||||||| || || ||| |
Sbjct 596717 GGGCGATATAATTGCCGTCCTGGAATCCGTGTACAAAGACTGGTGGAAAGGCTCGCTGAG 596776
Query 515 TGGACAGACCGGCATCTTCCCCCTCAACTATGTCGAGAAGCTGCAGGATCCTACCAAGGA 574
|| ||||| || || ||||| || ||||||||||||||||| | || ||||| |||
Sbjct 596777 AGGGCAGACTGGAATTTTCCCGCTAAACTATGTCGAGAAGCTCCCCGACCCTACGCCGGA 596836
Query 575 GGAGCTCGAGAGAGAAGCTCAGATGGAGGCGGAAGTCTTTGCGGAGATCAAGAACGTGGA 634
|| || || | ||||||||||||||||| ||||| |||| | ||||||||||| ||
Sbjct 596837 AGAACTGCAGCGGGAAGCTCAGATGGAGGCAGAAGTATTTGGACAAATCAAGAACGTTGA 596896
Query 635 GAAGCTGCTAGCTCTGCTGAGCACT---AGTTCGAGTGC-CGACGCTAGGGACAATGAGG 690
||| || | | || ||||||||| |||||| | || ||| ||| ||||| |
Sbjct 596897 GAAATTGTTGACGCTTCTGAGCACTAGCAGTTCG-GAGCTTAACGTCCAGGATAATGAAG 596955
Query 691 AGATCACTTCGCTGTACCACAAGACAGTGTCGATACGGCCGAAGTTGATCGAGCTCATTG 750
|||| || | |||||||| ||| | |||| |||||||| | |||||| | || |
Sbjct 596956 AGATAACGACTTTGTACCACTCGACGTTAGCGATTCGGCCGAAACTTATCGAGTTGATCG 597015
Query 751 GCAAGTATTCGCAAAAGAAGGGTAAGTGGAATCT---TTTACGCGAATTTGTGTGTTGGC 807
| ||||| ||||| ||||| |||| | | ||| | || || ||| |
Sbjct 597016 GAAAGTACTCGCAGAAGAAAGGTA--TATACTCTGAGCCTCCGTCGGGTTCACTGTGGCT 597073
Query 808 CACTGATCGTGTTCCAGATGATTTCACGCAGCTCAACGAGAAGTTCATCAAGGCACGCCG 867
||| | ||||||||| || || |||||||| || || || ||||| ||||| |
Sbjct 597074 CACAAA----CATCCAGATGAATTTACCCAGCTCAATGAAAAATTTATCAAAGCACGAAG 597129
Query 868 CGACTACGAAACCCTCCTTGAAGCCTCGATGTCGCAACC 906
|| ||||| | || ||||| || || ||||| || ||
Sbjct 597130 GGATTACGAGGCTCTGCTTGAGGCATCAATGTCCCATCC 597168
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 15945594244635
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |