Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Thielaviopsis_20musarum_20[genbank_20GCA_5F001513885.1_202016-01-13] 541 sequences; 28,417,647 total letters Query= NC_013699.1 Length=5018 Score E Sequences producing significant alignments: (Bits) Value seq3 203 1e-48 >seq3 Length=94568 Score = 203 bits (224), Expect = 1e-48 Identities = 217/287 (76%), Gaps = 0/287 (0%) Strand=Plus/Plus Query 372 GGAACCACAGCAGCTACCGTCTCCCGCGTTCGCGCCCTTTACGACTTCACGCCCTCGGAA 431 |||||||| ||||| || || || || || |||||| | |||||||| ||| ||||| Sbjct 34293 GGAACCACGGCAGCAACAGTGTCGCGGGTGCGCGCCATGTACGACTTTGTGCCGTCGGAG 34352 Query 432 CCCGGCGAGTTGGCTTTCCGCAAAGGCGACATTATTGCGGTTCTCGAGTCTGTGTACAAG 491 ||||| ||| || || |||||||||||||| || || ||||| ||||||||| Sbjct 34353 GAGGGCGAACTGGAGTTTAAAAAGGGCGACATTATTGCCGTGCTGGAGTCAGTGTACAAG 34412 Query 492 GACTGGTGGAAGGGTTCTCTGCGTGGACAGACCGGCATCTTCCCCCTCAACTATGTCGAG 551 ||||||||| || || |||||||| || || ||||||||||| || |||||||| ||| Sbjct 34413 GACTGGTGGCGCGGCTCGCTGCGTGGCCAAACGGGCATCTTCCCGCTAAACTATGTGGAG 34472 Query 552 AAGCTGCAGGATCCTACCAAGGAGGAGCTCGAGAGAGAAGCTCAGATGGAGGCGGAAGTC 611 |||||| |||||| || |||||||| || | || || ||||||||| ||||| Sbjct 34473 AAGCTGACGGATCCGACGCCTGAGGAGCTGCAGCGCGAGGCCATGATGGAGGCCGAAGTG 34532 Query 612 TTTGCGGAGATCAAGAACGTGGAGAAGCTGCTAGCTCTGCTGAGCAC 658 ||| | ||||| || || ||||||||| | |||| |||||||| Sbjct 34533 TTTTCCGAGATTCGCAATGTCGAGAAGCTGTTGACTCTACTGAGCAC 34579 Score = 102 bits (112), Expect = 3e-18 Identities = 83/101 (82%), Gaps = 0/101 (0%) Strand=Plus/Plus Query 822 CAGATGATTTCACGCAGCTCAACGAGAAGTTCATCAAGGCACGCCGCGACTACGAAACCC 881 |||| || || || ||||||||||| |||||||||||||| ||||||||||||||||||| Sbjct 34892 CAGACGACTTTACTCAGCTCAACGAAAAGTTCATCAAGGCCCGCCGCGACTACGAAACCC 34951 Query 882 TCCTTGAAGCCTCGATGTCGCAACCAGCGCAGCCCGGCTAC 922 | ||||| || || ||| | || || |||||| | | ||| Sbjct 34952 TGCTTGAGGCATCCATGGCACACCCGCCGCAGCACAGTTAC 34992 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 15945505646895