Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Thielaviopsis_20paradoxa_20[genbank_20GCA_5F001599055.1_202016-03- 01] 76 sequences; 29,468,565 total letters Query= NC_013699.1 Length=5018 Score E Sequences producing significant alignments: (Bits) Value seq11 215 2e-52 >seq11 Length=758386 Score = 215 bits (238), Expect = 2e-52 Identities = 220/287 (77%), Gaps = 0/287 (0%) Strand=Plus/Plus Query 372 GGAACCACAGCAGCTACCGTCTCCCGCGTTCGCGCCCTTTACGACTTCACGCCCTCGGAA 431 |||||||| ||||| || || || || || |||||| | |||||||| ||| || || Sbjct 144182 GGAACCACGGCAGCCACGGTGTCGCGGGTGCGCGCCATGTACGACTTTGTGCCGTCAGAG 144241 Query 432 CCCGGCGAGTTGGCTTTCCGCAAAGGCGACATTATTGCGGTTCTCGAGTCTGTGTACAAG 491 |||||| ||| ||| || |||||||| |||||||| || ||||||||||||||| Sbjct 144242 GAGGGCGAGCTGGAGTTCAAAAAGGGCGACATCATTGCGGTGCTGGAGTCTGTGTACAAG 144301 Query 492 GACTGGTGGAAGGGTTCTCTGCGTGGACAGACCGGCATCTTCCCCCTCAACTATGTCGAG 551 ||||||||| || || |||||||| ||||| ||||| ||||| ||||||||||||||| Sbjct 144302 GACTGGTGGCGCGGCTCGCTGCGTGGCCAGACGGGCATTTTCCCGCTCAACTATGTCGAG 144361 Query 552 AAGCTGCAGGATCCTACCAAGGAGGAGCTCGAGAGAGAAGCTCAGATGGAGGCGGAAGTC 611 |||||| ||| || || |||||||| || | || || ||||||||| || || Sbjct 144362 AAGCTGACGGACCCGACGCCCGAGGAGCTGCAGCGCGAGGCCATGATGGAGGCTGAGGTG 144421 Query 612 TTTGCGGAGATCAAGAACGTGGAGAAGCTGCTAGCTCTGCTGAGCAC 658 ||| | ||||| ||||| ||||||||| | | ||||||||||| Sbjct 144422 TTTTCCGAGATTCGCAACGTTGAGAAGCTGTTGACCCTGCTGAGCAC 144468 Score = 113 bits (124), Expect = 1e-21 Identities = 86/102 (84%), Gaps = 0/102 (0%) Strand=Plus/Plus Query 821 CCAGATGATTTCACGCAGCTCAACGAGAAGTTCATCAAGGCACGCCGCGACTACGAAACC 880 ||||| || || || ||||||||||| |||||||||||||| |||||||||||||||||| Sbjct 144698 CCAGACGACTTTACCCAGCTCAACGAAAAGTTCATCAAGGCCCGCCGCGACTACGAAACC 144757 Query 881 CTCCTTGAAGCCTCGATGTCGCAACCAGCGCAGCCCGGCTAC 922 || || || || |||||| |||| || |||||| | ||||| Sbjct 144758 CTGCTCGAGGCGTCGATGGCGCACCCGCCGCAGCACAGCTAC 144799 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 15945586745220