Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Thielaviopsis_20paradoxa_20[genbank_20GCA_5F001599055.1_202016-03-
01] 76 sequences; 29,468,565 total letters
Query= NC_013699.1
Length=5018
Score E
Sequences producing significant alignments: (Bits) Value
seq11 215 2e-52
>seq11
Length=758386
Score = 215 bits (238), Expect = 2e-52
Identities = 220/287 (77%), Gaps = 0/287 (0%)
Strand=Plus/Plus
Query 372 GGAACCACAGCAGCTACCGTCTCCCGCGTTCGCGCCCTTTACGACTTCACGCCCTCGGAA 431
|||||||| ||||| || || || || || |||||| | |||||||| ||| || ||
Sbjct 144182 GGAACCACGGCAGCCACGGTGTCGCGGGTGCGCGCCATGTACGACTTTGTGCCGTCAGAG 144241
Query 432 CCCGGCGAGTTGGCTTTCCGCAAAGGCGACATTATTGCGGTTCTCGAGTCTGTGTACAAG 491
|||||| ||| ||| || |||||||| |||||||| || |||||||||||||||
Sbjct 144242 GAGGGCGAGCTGGAGTTCAAAAAGGGCGACATCATTGCGGTGCTGGAGTCTGTGTACAAG 144301
Query 492 GACTGGTGGAAGGGTTCTCTGCGTGGACAGACCGGCATCTTCCCCCTCAACTATGTCGAG 551
||||||||| || || |||||||| ||||| ||||| ||||| |||||||||||||||
Sbjct 144302 GACTGGTGGCGCGGCTCGCTGCGTGGCCAGACGGGCATTTTCCCGCTCAACTATGTCGAG 144361
Query 552 AAGCTGCAGGATCCTACCAAGGAGGAGCTCGAGAGAGAAGCTCAGATGGAGGCGGAAGTC 611
|||||| ||| || || |||||||| || | || || ||||||||| || ||
Sbjct 144362 AAGCTGACGGACCCGACGCCCGAGGAGCTGCAGCGCGAGGCCATGATGGAGGCTGAGGTG 144421
Query 612 TTTGCGGAGATCAAGAACGTGGAGAAGCTGCTAGCTCTGCTGAGCAC 658
||| | ||||| ||||| ||||||||| | | |||||||||||
Sbjct 144422 TTTTCCGAGATTCGCAACGTTGAGAAGCTGTTGACCCTGCTGAGCAC 144468
Score = 113 bits (124), Expect = 1e-21
Identities = 86/102 (84%), Gaps = 0/102 (0%)
Strand=Plus/Plus
Query 821 CCAGATGATTTCACGCAGCTCAACGAGAAGTTCATCAAGGCACGCCGCGACTACGAAACC 880
||||| || || || ||||||||||| |||||||||||||| ||||||||||||||||||
Sbjct 144698 CCAGACGACTTTACCCAGCTCAACGAAAAGTTCATCAAGGCCCGCCGCGACTACGAAACC 144757
Query 881 CTCCTTGAAGCCTCGATGTCGCAACCAGCGCAGCCCGGCTAC 922
|| || || || |||||| |||| || |||||| | |||||
Sbjct 144758 CTGCTCGAGGCGTCGATGGCGCACCCGCCGCAGCACAGCTAC 144799
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 15945586745220
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |