Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Thielaviopsis_20punctulata_20[genbank_20GCA_5F000968615.1_202015-04- 03] 2,315 sequences; 28,117,660 total letters Query= NC_013699.1 Length=5018 Score E Sequences producing significant alignments: (Bits) Value seq1662 203 1e-48 >seq1662 Length=155081 Score = 203 bits (224), Expect = 1e-48 Identities = 217/287 (76%), Gaps = 0/287 (0%) Strand=Plus/Minus Query 372 GGAACCACAGCAGCTACCGTCTCCCGCGTTCGCGCCCTTTACGACTTCACGCCCTCGGAA 431 || || || ||||| || || || || || || ||| | |||||||| |||| |||||| Sbjct 115888 GGGACGACTGCAGCCACAGTGTCGCGGGTACGGGCCATGTACGACTTTGCGCCGTCGGAA 115829 Query 432 CCCGGCGAGTTGGCTTTCCGCAAAGGCGACATTATTGCGGTTCTCGAGTCTGTGTACAAG 491 |||||| ||| || || |||||||||||||| || || ||||| ||||||||| Sbjct 115828 GAAGGCGAGCTGGAGTTTAAAAAGGGCGACATTATTGCCGTGCTGGAGTCGGTGTACAAG 115769 Query 492 GACTGGTGGAAGGGTTCTCTGCGTGGACAGACCGGCATCTTCCCCCTCAACTATGTCGAG 551 ||||||||| || |||||||| || ||||| ||||||||||| ||||||||||||||| Sbjct 115768 GACTGGTGGCGCGGATCTCTGCGCGGTCAGACGGGCATCTTCCCGCTCAACTATGTCGAG 115709 Query 552 AAGCTGCAGGATCCTACCAAGGAGGAGCTCGAGAGAGAAGCTCAGATGGAGGCGGAAGTC 611 || ||| |||||| || ||||| || ||||||| || |||||| || ||||| Sbjct 115708 AAACTGACGGATCCGACTCCAGAGGAACTGCAGAGAGAGGCGATGATGGAAGCCGAAGTG 115649 Query 612 TTTGCGGAGATCAAGAACGTGGAGAAGCTGCTAGCTCTGCTGAGCAC 658 ||| | ||||| || || ||||||||| | | || ||||||| Sbjct 115648 TTTTCCGAGATTCGCAATGTCGAGAAGCTGTTGACGCTTTTGAGCAC 115602 Score = 87.8 bits (96), Expect = 6e-14 Identities = 74/91 (81%), Gaps = 0/91 (0%) Strand=Plus/Minus Query 822 CAGATGATTTCACGCAGCTCAACGAGAAGTTCATCAAGGCACGCCGCGACTACGAAACCC 881 |||| || ||||| ||||||||||| || ||||||||||| ||||| ||||||||||| | Sbjct 115345 CAGACGACTTCACCCAGCTCAACGAAAAATTCATCAAGGCTCGCCGTGACTACGAAACTC 115286 Query 882 TCCTTGAAGCCTCGATGTCGCAACCAGCGCA 912 | || || ||||| ||| | || || |||| Sbjct 115285 TTCTCGAGGCCTCCATGGCCCACCCGCCGCA 115255 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 15945196252425