Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Torrubiella_20hemipterigena_20[genbank_20GCA_5F000825705.1_202014- 12-05] 26 sequences; 28,476,206 total letters Query= NC_013699.1 Length=5018 Score E Sequences producing significant alignments: (Bits) Value seq3 212 2e-51 >seq3 Length=4610873 Score = 212 bits (234), Expect = 2e-51 Identities = 294/408 (72%), Gaps = 9/408 (2%) Strand=Plus/Plus Query 370 CTGGAACCACAGCAGCTACCGTCTCCCGCGTTCGCGCCCTTTACGACTTCACGCCCTCGG 429 |||| ||||| || || || || ||| || || || | | |||||| ||||| | Sbjct 3263167 CTGGTACCACTGCTGCGACAGTGAGCCGTGTCCGAGCTTTATTCGACTTTGTACCCTCAG 3263226 Query 430 AACCCGGCGAGTTGGCTTTCCGCAAAGGCGACATTATTGCGGTTCTCGAGTCTGTGTACA 489 | ||||| ||| | | ||| || |||||| | ||||| ||||| |||||||| |||| Sbjct 3263227 AGCCCGGAGAGCTTGAGTTCAAAAAGGGCGACGTCATTGCTGTTCTGGAGTCTGTCTACA 3263286 Query 490 AGGACTGGTGGAAGGGTTCTCTGCGTGGACAGACCGGCATCTTCCCCCTCAACTATGTCG 549 ||||||||||| ||||| || || | || ||||| ||||| || || || || | Sbjct 3263287 AGGACTGGTGGCGAGGTTCGCTCAAGGGCAATACTGGCATTTTCCCGCTGAATTACGTGG 3263346 Query 550 AGAAGCTGCAGGATCCTACCAAGGAGGAGCTCGAGAGAGAAGCTCAGATGGAGGCGGAAG 609 ||||||| ||||||||| || ||||| || | ||||| |||||||||||||||| Sbjct 3263347 AGAAGCTTACGGATCCTACTCCAGATGAGCTTCAGCGGGAAGCACAGATGGAGGCGGAAG 3263406 Query 610 TCTTTGCGGAGATCAAGAACGTGGAGAAGCTGCTAGCTCTGCTGAGCACTAGTTCGA--- 666 | ||||| |||||||||||||||||||||||| | ||||||| || | || | | Sbjct 3263407 TGTTTGCTGAGATCAAGAACGTGGAGAAGCTGTTGACTCTGCTCAGTGC--GTCCAACAC 3263464 Query 667 -GTGCCGACGCTAGG--GACAATGAGGAGATCACTTCGCTGTACCACAAGACAGTGTCGA 723 | ||| | | ||| || || |||||||| | |||||||||| | || | | | Sbjct 3263465 CGGGCC-AAGGGAGGAAGATAACGAGGAGATTTCAAAGCTGTACCACCAAACTCTCGCCA 3263523 Query 724 TACGGCCGAAGTTGATCGAGCTCATTGGCAAGTATTCGCAAAAGAAGG 771 |||| || ||| |||| || | |||| ||||| ||||| ||||||| Sbjct 3263524 TACGCCCCAAGCTGATTAAGTTGATTGAGAAGTACTCGCAGAAGAAGG 3263571 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 15945595465470