Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichoderma_20asperellum_20[genbank_20GCA_5F000733085.2_202015-06-
08] 1,439 sequences; 37,686,724 total letters
Query= NC_013699.1
Length=5018
Score E
Sequences producing significant alignments: (Bits) Value
seq156 185 3e-43
>seq156
Length=78955
Score = 185 bits (204), Expect = 3e-43
Identities = 242/333 (73%), Gaps = 9/333 (3%)
Strand=Plus/Plus
Query 369 TCTGGAACCACAGCAGCTACCGTCTCCCGCGTTCGCGCCCTTTACGACTTCACGCCCTCG 428
|| || || ||||| ||||| || | | || || || || | |||||| |||| |
Sbjct 46811 TCGGGCACTACAGCTGCTACTGTGAGCAGAGTGCGTGCTCTGTTCGACTTTGAGCCCACC 46870
Query 429 GAACCCGGCGAGTTGGCTTTCCGCAAAGGCGACATTATTGCGGTTCTCGAGTCTGTGTAC 488
|| ||||||||| ||| ||| || |||||| | || || || || ||| |||||||
Sbjct 46871 GAGCCCGGCGAGCTGGAGTTCAAAAAGGGCGACGTCATCGCTGTGCTAGAGAGTGTGTAC 46930
Query 489 AAGGACTGGTGGAAGGGTTCTCTGCGTGGACAGACCGGCATCTTCCCCCTCAACTATGTC 548
|||||||||||| || || || ||| |||| ||||| |||||||||||||| ||
Sbjct 46931 AAGGACTGGTGGCGCGGGTCGCTCAAGGGAAAGACGGGCATTTTCCCCCTCAACTACGTA 46990
Query 549 GAGAAGCTGCAGGATCCTACCAAGGAGGAGCTCGAGAGAGAAGCTCAGATGGAGGCGGAA 608
||||||||| |||||| || ||||||| | || |||| || ||||||||||| ||
Sbjct 46991 GAGAAGCTGACGGATCCCACGCCGGAGGAGATGCAGCGAGAGGCCCAGATGGAGGCTGAG 47050
Query 609 GTCTTTGCGGAGATCAAGAACGTGGAGAAGCTGCTAGCTCTGCTGAGCACTAGTTCGA-- 666
|| || || ||||||||||| |||||||| || | | || |||||| | |||||
Sbjct 47051 GTTTTCGCTGAGATCAAGAATGTGGAGAAACTCTTGACGCTCCTGAGCGC---TTCGAAC 47107
Query 667 --GTGCCGACGCTA--GGGACAATGAGGAGATC 695
| | | ||| | ||||||||||||||||
Sbjct 47108 ATGGGACCACGGGAAGAGGACAATGAGGAGATC 47140
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 15945349031205
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |