Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichoderma_20atroviride_20[genbank_20GCA_5F000963795.1_202015-03-
26] 131 sequences; 36,403,196 total letters
Query= NC_013699.1
Length=5018
Score E
Sequences producing significant alignments: (Bits) Value
seq44 170 6e-39
>seq44
Length=3047126
Score = 170 bits (188), Expect = 6e-39
Identities = 201/272 (74%), Gaps = 0/272 (0%)
Strand=Plus/Minus
Query 369 TCTGGAACCACAGCAGCTACCGTCTCCCGCGTTCGCGCCCTTTACGACTTCACGCCCTCG 428
|| || || || || ||||| || | | || || ||| | | |||||| |||| |
Sbjct 1541253 TCGGGTACTACGGCTGCTACGGTGAGCAGGGTGCGTGCCTTGTTCGACTTTGAGCCCACC 1541194
Query 429 GAACCCGGCGAGTTGGCTTTCCGCAAAGGCGACATTATTGCGGTTCTCGAGTCTGTGTAC 488
|| ||||||||| | | ||| || |||||| | || || || || ||| ||||||
Sbjct 1541193 GAGCCCGGCGAGCTAGAATTCAAAAAGGGCGACGTCATCGCTGTGCTGGAGAGCGTGTAC 1541134
Query 489 AAGGACTGGTGGAAGGGTTCTCTGCGTGGACAGACCGGCATCTTCCCCCTCAACTATGTC 548
|||||||||||| || || || ||| |||| |||||||| || |||||||||||
Sbjct 1541133 AAGGACTGGTGGCGCGGGTCGCTCAAGGGAAAGACGGGCATCTTTCCTCTCAACTATGTA 1541074
Query 549 GAGAAGCTGCAGGATCCTACCAAGGAGGAGCTCGAGAGAGAAGCTCAGATGGAGGCGGAA 608
||||||||| ||||||||| ||| ||| | || | || || ||||||||||| ||
Sbjct 1541073 GAGAAGCTGACGGATCCTACGCCGGAAGAGATGCAGCGGGAGGCCCAGATGGAGGCTGAG 1541014
Query 609 GTCTTTGCGGAGATCAAGAACGTGGAGAAGCT 640
|||||||| ||||||||||| || ||||||||
Sbjct 1541013 GTCTTTGCCGAGATCAAGAATGTTGAGAAGCT 1540982
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 15945577152945
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |