Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichoderma_20atroviride_20[genbank_20GCA_5F000963795.1_202015-03- 26] 131 sequences; 36,403,196 total letters Query= NC_013699.1 Length=5018 Score E Sequences producing significant alignments: (Bits) Value seq44 170 6e-39 >seq44 Length=3047126 Score = 170 bits (188), Expect = 6e-39 Identities = 201/272 (74%), Gaps = 0/272 (0%) Strand=Plus/Minus Query 369 TCTGGAACCACAGCAGCTACCGTCTCCCGCGTTCGCGCCCTTTACGACTTCACGCCCTCG 428 || || || || || ||||| || | | || || ||| | | |||||| |||| | Sbjct 1541253 TCGGGTACTACGGCTGCTACGGTGAGCAGGGTGCGTGCCTTGTTCGACTTTGAGCCCACC 1541194 Query 429 GAACCCGGCGAGTTGGCTTTCCGCAAAGGCGACATTATTGCGGTTCTCGAGTCTGTGTAC 488 || ||||||||| | | ||| || |||||| | || || || || ||| |||||| Sbjct 1541193 GAGCCCGGCGAGCTAGAATTCAAAAAGGGCGACGTCATCGCTGTGCTGGAGAGCGTGTAC 1541134 Query 489 AAGGACTGGTGGAAGGGTTCTCTGCGTGGACAGACCGGCATCTTCCCCCTCAACTATGTC 548 |||||||||||| || || || ||| |||| |||||||| || ||||||||||| Sbjct 1541133 AAGGACTGGTGGCGCGGGTCGCTCAAGGGAAAGACGGGCATCTTTCCTCTCAACTATGTA 1541074 Query 549 GAGAAGCTGCAGGATCCTACCAAGGAGGAGCTCGAGAGAGAAGCTCAGATGGAGGCGGAA 608 ||||||||| ||||||||| ||| ||| | || | || || ||||||||||| || Sbjct 1541073 GAGAAGCTGACGGATCCTACGCCGGAAGAGATGCAGCGGGAGGCCCAGATGGAGGCTGAG 1541014 Query 609 GTCTTTGCGGAGATCAAGAACGTGGAGAAGCT 640 |||||||| ||||||||||| || |||||||| Sbjct 1541013 GTCTTTGCCGAGATCAAGAATGTTGAGAAGCT 1540982 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 15945577152945