Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichoderma_20gamsii_20[genbank_20GCA_5F001481775.1_202015-12-23] 381 sequences; 37,970,415 total letters Query= NC_013699.1 Length=5018 Score E Sequences producing significant alignments: (Bits) Value seq38 163 9e-37 >seq38 Length=333631 Score = 163 bits (180), Expect = 9e-37 Identities = 212/293 (72%), Gaps = 0/293 (0%) Strand=Plus/Plus Query 367 CATCTGGAACCACAGCAGCTACCGTCTCCCGCGTTCGCGCCCTTTACGACTTCACGCCCT 426 |||| || || || || |||||||| | | || || ||| | | |||||| |||| Sbjct 253896 CATCGGGGACTACGGCTGCTACCGTAAGCAGAGTGCGTGCCTTGTTCGACTTTGAGCCCA 253955 Query 427 CGGAACCCGGCGAGTTGGCTTTCCGCAAAGGCGACATTATTGCGGTTCTCGAGTCTGTGT 486 | ||||||||||| ||| ||| || ||||| | || || || || ||| || | Sbjct 253956 CCGAACCCGGCGAACTGGAGTTCAAAAAGGGCGATGTCATCGCTGTGCTGGAGAGCGTAT 254015 Query 487 ACAAGGACTGGTGGAAGGGTTCTCTGCGTGGACAGACCGGCATCTTCCCCCTCAACTATG 546 |||| ||||||||| || || || ||| |||| |||||||| || |||||||||| Sbjct 254016 ACAAAGACTGGTGGCGCGGGTCGCTCAAGGGAAAGACGGGCATCTTTCCTCTCAACTATG 254075 Query 547 TCGAGAAGCTGCAGGATCCTACCAAGGAGGAGCTCGAGAGAGAAGCTCAGATGGAGGCGG 606 | ||||||||| ||| ||||| ||| ||| | || | || || ||||||||||| | Sbjct 254076 TAGAGAAGCTGACGGACCCTACGCCGGAAGAGATGCAGCGGGAGGCCCAGATGGAGGCTG 254135 Query 607 AAGTCTTTGCGGAGATCAAGAACGTGGAGAAGCTGCTAGCTCTGCTGAGCACT 659 | || ||||| ||||||||||| || |||||||| | | || |||||| || Sbjct 254136 AGGTTTTTGCCGAGATCAAGAATGTTGAGAAGCTCTTGACGCTCCTGAGCGCT 254188 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 15945533551695