Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichoderma_20guizhouense_20[genbank_20GCA_5F002022785.1_202017-03-
07] 63 sequences; 38,329,450 total letters
Query= NC_013699.1
Length=5018
Score E
Sequences producing significant alignments: (Bits) Value
seq7 228 3e-56
>seq7
Length=2414983
Score = 228 bits (252), Expect = 3e-56
Identities = 225/291 (77%), Gaps = 0/291 (0%)
Strand=Plus/Minus
Query 369 TCTGGAACCACAGCAGCTACCGTCTCCCGCGTTCGCGCCCTTTACGACTTCACGCCCTCG 428
|| || ||||| || || || ||| | | || |||||||| | ||||| |||||| |
Sbjct 940268 TCAGGTACCACGGCTGCCACGGTCAGCAGGGTACGCGCCCTCTTTGACTTTACGCCCACT 940209
Query 429 GAACCCGGCGAGTTGGCTTTCCGCAAAGGCGACATTATTGCGGTTCTCGAGTCTGTGTAC 488
|||||||||||| ||| ||| || || || | ||||| || || ||| ||||||
Sbjct 940208 GAACCCGGCGAGCTGGAATTCAAGAAGGGTGATGTCATTGCTGTGCTGGAGAGCGTGTAC 940149
Query 489 AAGGACTGGTGGAAGGGTTCTCTGCGTGGACAGACCGGCATCTTCCCCCTCAACTATGTC 548
||||| |||||| || || || ||| |||| ||||||||||| ||||||||||||
Sbjct 940148 AAGGATTGGTGGCGTGGATCGCTCAAGGGAAAGACGGGCATCTTCCCTCTCAACTATGTC 940089
Query 549 GAGAAGCTGCAGGATCCTACCAAGGAGGAGCTCGAGAGAGAAGCTCAGATGGAGGCGGAA 608
||||||||| ||||| || |||||| | ||||||| ||||||||||| ||||||
Sbjct 940088 GAGAAGCTGGCTGATCCCACACCAGAGGAGATGCAGAGAGAGGCTCAGATGGAAGCGGAA 940029
Query 609 GTCTTTGCGGAGATCAAGAACGTGGAGAAGCTGCTAGCTCTGCTGAGCACT 659
|||||||| ||||||||||||||||||||||| ||| | ||| ||||| ||
Sbjct 940028 GTCTTTGCTGAGATCAAGAACGTGGAGAAGCTCCTAACGCTGTTGAGCGCT 939978
Score = 95.1 bits (104), Expect = 4e-16
Identities = 159/224 (71%), Gaps = 7/224 (3%)
Strand=Plus/Minus
Query 702 CTGTACCACAAGACAGTGTCGATACGGCCGAAGTTGATCGAGCTCATTGGCAAGTATTCG 761
|| || ||| |||| | | || || || ||| ||||| |||| |||| ||||||||
Sbjct 939854 CTATATCACCAGACGCTTGCAATCCGCCCAAAGCTGATCAAGCTGATTGAGAAGTATTCT 939795
Query 762 CAAAAGAAGGGTAAGTGGAATCTTTTAC-GCGAAT--TTGTGTGTTGGCCACTGATCGTG 818
|||||||||||||| || ||| || ||| || |||| ||| | | | | |
Sbjct 939794 CAAAAGAAGGGTAATGACCAT-TTTCACTGCGTATCATTGTTCATTG-CTAATAACCAAC 939737
Query 819 TTCCAGATGATTTCACGCAGCTCAACGAGAAGTTCATCAAGGCACGCCGCGACTACGAAA 878
||||||| ||||| ||||||||||| |||||||||||||| || | ||||| |||
Sbjct 939736 G--CAGATGACTTCACCCAGCTCAACGAAAAGTTCATCAAGGCTCGAAGAGACTATGAAT 939679
Query 879 CCCTCCTTGAAGCCTCGATGTCGCAACCAGCGCAGCCCGGCTAC 922
| || || ||| | || ||||| || || | |||| | ||||
Sbjct 939678 CGCTGCTAGAATCGTCCATGTCTCATCCTCCTCAGCACAACTAC 939635
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 15945589012485
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |