Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichoderma_20guizhouense_20[genbank_20GCA_5F002022785.1_202017-03- 07] 63 sequences; 38,329,450 total letters Query= NC_013699.1 Length=5018 Score E Sequences producing significant alignments: (Bits) Value seq7 228 3e-56 >seq7 Length=2414983 Score = 228 bits (252), Expect = 3e-56 Identities = 225/291 (77%), Gaps = 0/291 (0%) Strand=Plus/Minus Query 369 TCTGGAACCACAGCAGCTACCGTCTCCCGCGTTCGCGCCCTTTACGACTTCACGCCCTCG 428 || || ||||| || || || ||| | | || |||||||| | ||||| |||||| | Sbjct 940268 TCAGGTACCACGGCTGCCACGGTCAGCAGGGTACGCGCCCTCTTTGACTTTACGCCCACT 940209 Query 429 GAACCCGGCGAGTTGGCTTTCCGCAAAGGCGACATTATTGCGGTTCTCGAGTCTGTGTAC 488 |||||||||||| ||| ||| || || || | ||||| || || ||| |||||| Sbjct 940208 GAACCCGGCGAGCTGGAATTCAAGAAGGGTGATGTCATTGCTGTGCTGGAGAGCGTGTAC 940149 Query 489 AAGGACTGGTGGAAGGGTTCTCTGCGTGGACAGACCGGCATCTTCCCCCTCAACTATGTC 548 ||||| |||||| || || || ||| |||| ||||||||||| |||||||||||| Sbjct 940148 AAGGATTGGTGGCGTGGATCGCTCAAGGGAAAGACGGGCATCTTCCCTCTCAACTATGTC 940089 Query 549 GAGAAGCTGCAGGATCCTACCAAGGAGGAGCTCGAGAGAGAAGCTCAGATGGAGGCGGAA 608 ||||||||| ||||| || |||||| | ||||||| ||||||||||| |||||| Sbjct 940088 GAGAAGCTGGCTGATCCCACACCAGAGGAGATGCAGAGAGAGGCTCAGATGGAAGCGGAA 940029 Query 609 GTCTTTGCGGAGATCAAGAACGTGGAGAAGCTGCTAGCTCTGCTGAGCACT 659 |||||||| ||||||||||||||||||||||| ||| | ||| ||||| || Sbjct 940028 GTCTTTGCTGAGATCAAGAACGTGGAGAAGCTCCTAACGCTGTTGAGCGCT 939978 Score = 95.1 bits (104), Expect = 4e-16 Identities = 159/224 (71%), Gaps = 7/224 (3%) Strand=Plus/Minus Query 702 CTGTACCACAAGACAGTGTCGATACGGCCGAAGTTGATCGAGCTCATTGGCAAGTATTCG 761 || || ||| |||| | | || || || ||| ||||| |||| |||| |||||||| Sbjct 939854 CTATATCACCAGACGCTTGCAATCCGCCCAAAGCTGATCAAGCTGATTGAGAAGTATTCT 939795 Query 762 CAAAAGAAGGGTAAGTGGAATCTTTTAC-GCGAAT--TTGTGTGTTGGCCACTGATCGTG 818 |||||||||||||| || ||| || ||| || |||| ||| | | | | | Sbjct 939794 CAAAAGAAGGGTAATGACCAT-TTTCACTGCGTATCATTGTTCATTG-CTAATAACCAAC 939737 Query 819 TTCCAGATGATTTCACGCAGCTCAACGAGAAGTTCATCAAGGCACGCCGCGACTACGAAA 878 ||||||| ||||| ||||||||||| |||||||||||||| || | ||||| ||| Sbjct 939736 G--CAGATGACTTCACCCAGCTCAACGAAAAGTTCATCAAGGCTCGAAGAGACTATGAAT 939679 Query 879 CCCTCCTTGAAGCCTCGATGTCGCAACCAGCGCAGCCCGGCTAC 922 | || || ||| | || ||||| || || | |||| | |||| Sbjct 939678 CGCTGCTAGAATCGTCCATGTCTCATCCTCCTCAGCACAACTAC 939635 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 15945589012485