Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichoderma_20harzianum_20[genbank_20GCA_5F000988865.1_202015-05-06]
1,572 sequences; 39,721,542 total letters
Query= NC_013699.1
Length=5018
Score E
Sequences producing significant alignments: (Bits) Value
seq146 196 2e-46
>seq146
Length=78441
Score = 196 bits (216), Expect = 2e-46
Identities = 218/291 (75%), Gaps = 0/291 (0%)
Strand=Plus/Plus
Query 369 TCTGGAACCACAGCAGCTACCGTCTCCCGCGTTCGCGCCCTTTACGACTTCACGCCCTCG 428
|| || ||||| || || || ||| | | || |||||||| | ||||| || ||| |
Sbjct 47508 TCAGGTACCACGGCTGCCACGGTCAGCAGGGTACGCGCCCTCTTTGACTTTACTCCCACT 47567
Query 429 GAACCCGGCGAGTTGGCTTTCCGCAAAGGCGACATTATTGCGGTTCTCGAGTCTGTGTAC 488
||||| |||||| ||| ||| || || || | ||||| || || ||| ||||||
Sbjct 47568 GAACCTGGCGAGCTGGAATTCAAGAAGGGTGATGTCATTGCTGTGCTGGAGAGCGTGTAC 47627
Query 489 AAGGACTGGTGGAAGGGTTCTCTGCGTGGACAGACCGGCATCTTCCCCCTCAACTATGTC 548
||||| |||||| || || || ||| |||| ||||||||||| |||||||| |||
Sbjct 47628 AAGGATTGGTGGCGTGGATCGCTCAAGGGAAAGACGGGCATCTTCCCTCTCAACTACGTC 47687
Query 549 GAGAAGCTGCAGGATCCTACCAAGGAGGAGCTCGAGAGAGAAGCTCAGATGGAGGCGGAA 608
||||| ||| ||||| || |||||| | || |||| ||||||||||| |||||
Sbjct 47688 GAGAAACTGGCAGATCCCACACCAGAGGAGATGCAGCGAGAGGCTCAGATGGAAGCGGAG 47747
Query 609 GTCTTTGCGGAGATCAAGAACGTGGAGAAGCTGCTAGCTCTGCTGAGCACT 659
|| ||||| ||||||||||||||||||||||| ||| | ||| ||||| ||
Sbjct 47748 GTTTTTGCTGAGATCAAGAACGTGGAGAAGCTCCTAACGCTGTTGAGCGCT 47798
Score = 91.5 bits (100), Expect = 5e-15
Identities = 158/227 (70%), Gaps = 12/227 (5%)
Strand=Plus/Plus
Query 702 CTGTACCACAAGACAGTGTCGATACGGCCGAAGTTGATCGAGCTCATTGGCAAGTATTCG 761
|| || ||| |||| | | || || || ||| ||||| |||| |||| || |||||
Sbjct 47924 CTATATCACCAGACGCTTGCAATCCGCCCTAAGCTGATCAAGCTGATTGAGAAATATTCT 47983
Query 762 CAAAAGAAGGGTAAGTGGAATCTTTTAC--GCGAATTTGTGTGTTGGCCACTGATCGTGT 819
|||||||||||||| ||| |||| || ||| | | ||| | ||| | |
Sbjct 47984 CAAAAGAAGGGTAA-TGGCCACTTTCACCTGCGTA-----GCATTGCACGCTGCTAATAA 48037
Query 820 TC----CAGATGATTTCACGCAGCTCAACGAGAAGTTCATCAAGGCACGCCGCGACTACG 875
| ||||||| ||||| ||||||||||| |||||||||||||| || | ||||| |
Sbjct 48038 CCAACGCAGATGACTTCACCCAGCTCAACGAAAAGTTCATCAAGGCTCGAAGAGACTATG 48097
Query 876 AAACCCTCCTTGAAGCCTCGATGTCGCAACCAGCGCAGCCCGGCTAC 922
|| | || || ||| | || ||||| || || | |||| | ||||
Sbjct 48098 AATCGCTGCTAGAATCGTCCATGTCTCATCCTCCTCAGCACAACTAC 48144
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 15945325835340
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |