Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichoderma_20harzianum_20[genbank_20GCA_5F001990665.1_202017-02-08]
1,054 sequences; 40,676,380 total letters
Query= NC_013699.1
Length=5018
Score E
Sequences producing significant alignments: (Bits) Value
seq278 210 7e-51
>seq278
Length=477856
Score = 210 bits (232), Expect = 7e-51
Identities = 221/291 (76%), Gaps = 0/291 (0%)
Strand=Plus/Minus
Query 369 TCTGGAACCACAGCAGCTACCGTCTCCCGCGTTCGCGCCCTTTACGACTTCACGCCCTCG 428
|| || ||||| || || || ||| | | || |||||||| | |||||| |||||| |
Sbjct 31036 TCAGGTACCACGGCTGCCACGGTCAGCAGGGTGCGCGCCCTCTTCGACTTTACGCCCACC 30977
Query 429 GAACCCGGCGAGTTGGCTTTCCGCAAAGGCGACATTATTGCGGTTCTCGAGTCTGTGTAC 488
|||||||||||| ||| ||| || || || | ||||| || || ||| ||||||
Sbjct 30976 GAACCCGGCGAGCTGGAATTCAAGAAGGGTGATGTCATTGCTGTGCTGGAGAGCGTGTAC 30917
Query 489 AAGGACTGGTGGAAGGGTTCTCTGCGTGGACAGACCGGCATCTTCCCCCTCAACTATGTC 548
||||| |||||| || || || ||| |||| ||||||||||| |||||||| |||
Sbjct 30916 AAGGATTGGTGGCGTGGATCGCTCAAGGGAAAGACTGGCATCTTCCCTCTCAACTACGTC 30857
Query 549 GAGAAGCTGCAGGATCCTACCAAGGAGGAGCTCGAGAGAGAAGCTCAGATGGAGGCGGAA 608
|||||||| ||||||||| |||||| | || |||| ||||||||||| |||||
Sbjct 30856 GAGAAGCTAGCGGATCCTACACCAGAGGAGATGCAGCGAGAGGCTCAGATGGAAGCGGAG 30797
Query 609 GTCTTTGCGGAGATCAAGAACGTGGAGAAGCTGCTAGCTCTGCTGAGCACT 659
|| || || ||||||||||||||||||||||| || | ||| ||||| ||
Sbjct 30796 GTTTTCGCTGAGATCAAGAACGTGGAGAAGCTCCTGACGCTGTTGAGCGCT 30746
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 15945416177130
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |