Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichoderma_20koningii_20[genbank_20GCA_5F001950475.1_202016-12-09] 13 sequences; 32,322,684 total letters Query= NC_013699.1 Length=5018 Score E Sequences producing significant alignments: (Bits) Value seq2 235 2e-58 >seq2 Length=5759010 Score = 235 bits (260), Expect = 2e-58 Identities = 225/288 (78%), Gaps = 0/288 (0%) Strand=Plus/Minus Query 369 TCTGGAACCACAGCAGCTACCGTCTCCCGCGTTCGCGCCCTTTACGACTTCACGCCCTCG 428 || || || ||||| ||||||||| | | ||||||||||| | ||||||| |||| | Sbjct 3693016 TCCGGTACAACAGCTGCTACCGTCAGCAGGGTTCGCGCCCTCTTCGACTTCGTGCCCACC 3692957 Query 429 GAACCCGGCGAGTTGGCTTTCCGCAAAGGCGACATTATTGCGGTTCTCGAGTCTGTGTAC 488 || ||||||||| ||| ||| || || || | ||||| || || ||| |||| | Sbjct 3692956 GAGCCCGGCGAGCTGGAGTTCAAGAAGGGAGATGTCATTGCTGTGCTGGAGAGCGTGTTC 3692897 Query 489 AAGGACTGGTGGAAGGGTTCTCTGCGTGGACAGACCGGCATCTTCCCCCTCAACTATGTC 548 |||||||||||| || || || | ||| |||| ||||||||||| |||||||||||| Sbjct 3692896 AAGGACTGGTGGCGCGGCTCGCTCAGGGGAAAGACGGGCATCTTCCCTCTCAACTATGTC 3692837 Query 549 GAGAAGCTGCAGGATCCTACCAAGGAGGAGCTCGAGAGAGAAGCTCAGATGGAGGCGGAA 608 ||||||||| ||||||||| |||||| | || | || |||||||||||||| || Sbjct 3692836 GAGAAGCTGACGGATCCTACGCCTGAGGAGATGCAGCGGGAGGCTCAGATGGAGGCAGAG 3692777 Query 609 GTCTTTGCGGAGATCAAGAACGTGGAGAAGCTGCTAGCTCTGCTGAGC 656 |||||||| |||||||||||||||||||||||||| | ||| ||||| Sbjct 3692776 GTCTTTGCCGAGATCAAGAACGTGGAGAAGCTGCTCACGCTGTTGAGC 3692729 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 15945597732735