Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichoderma_20koningii_20[genbank_20GCA_5F001950475.1_202016-12-09]
13 sequences; 32,322,684 total letters
Query= NC_013699.1
Length=5018
Score E
Sequences producing significant alignments: (Bits) Value
seq2 235 2e-58
>seq2
Length=5759010
Score = 235 bits (260), Expect = 2e-58
Identities = 225/288 (78%), Gaps = 0/288 (0%)
Strand=Plus/Minus
Query 369 TCTGGAACCACAGCAGCTACCGTCTCCCGCGTTCGCGCCCTTTACGACTTCACGCCCTCG 428
|| || || ||||| ||||||||| | | ||||||||||| | ||||||| |||| |
Sbjct 3693016 TCCGGTACAACAGCTGCTACCGTCAGCAGGGTTCGCGCCCTCTTCGACTTCGTGCCCACC 3692957
Query 429 GAACCCGGCGAGTTGGCTTTCCGCAAAGGCGACATTATTGCGGTTCTCGAGTCTGTGTAC 488
|| ||||||||| ||| ||| || || || | ||||| || || ||| |||| |
Sbjct 3692956 GAGCCCGGCGAGCTGGAGTTCAAGAAGGGAGATGTCATTGCTGTGCTGGAGAGCGTGTTC 3692897
Query 489 AAGGACTGGTGGAAGGGTTCTCTGCGTGGACAGACCGGCATCTTCCCCCTCAACTATGTC 548
|||||||||||| || || || | ||| |||| ||||||||||| ||||||||||||
Sbjct 3692896 AAGGACTGGTGGCGCGGCTCGCTCAGGGGAAAGACGGGCATCTTCCCTCTCAACTATGTC 3692837
Query 549 GAGAAGCTGCAGGATCCTACCAAGGAGGAGCTCGAGAGAGAAGCTCAGATGGAGGCGGAA 608
||||||||| ||||||||| |||||| | || | || |||||||||||||| ||
Sbjct 3692836 GAGAAGCTGACGGATCCTACGCCTGAGGAGATGCAGCGGGAGGCTCAGATGGAGGCAGAG 3692777
Query 609 GTCTTTGCGGAGATCAAGAACGTGGAGAAGCTGCTAGCTCTGCTGAGC 656
|||||||| |||||||||||||||||||||||||| | ||| |||||
Sbjct 3692776 GTCTTTGCCGAGATCAAGAACGTGGAGAAGCTGCTCACGCTGTTGAGC 3692729
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 15945597732735
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |