Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichoderma_20parareesei_20[genbank_20GCA_5F001050175.1_202015-07- 08] 885 sequences; 32,070,663 total letters Query= NC_013699.1 Length=5018 Score E Sequences producing significant alignments: (Bits) Value seq403 196 2e-46 >seq403 Length=137200 Score = 196 bits (216), Expect = 2e-46 Identities = 245/333 (74%), Gaps = 11/333 (3%) Strand=Plus/Minus Query 369 TCTGGAACCACAGCAGCTACCGTCTCCCGCGTTCGCGCCCTTTACGACTTCACGCCCTCG 428 || || || || || || || ||| | | ||||||||||| | |||||| |||| | Sbjct 34238 TCCGGTACTACGGCTGCCACGGTCAGCAGGGTTCGCGCCCTCTTCGACTTTGTGCCCACC 34179 Query 429 GAACCCGGCGAGTTGGCTTTCCGCAAAGGCGACATTATTGCGGTTCTCGAGTCTGTGTAC 488 || ||||||||| ||| ||| || || || | ||||| || | ||| |||||| Sbjct 34178 GAGCCCGGCGAGCTGGAGTTCAAGAAGGGAGATGTCATTGCCGTGTTGGAGAGCGTGTAC 34119 Query 489 AAGGACTGGTGGAAGGGTTCTCTGCGTGGACAGACCGGCATCTTCCCCCTCAACTATGTC 548 |||||||||||| || || || | ||| |||| || |||||||| || || || ||| Sbjct 34118 AAGGACTGGTGGCGCGGCTCACTCAGGGGAAAGACGGGTATCTTCCCTCTGAATTACGTC 34059 Query 549 GAGAAGCTGCAGGATCCTACCAAGGAGGAGCTCGAGAGAGAAGCTCAGATGGAGGCGGAA 608 ||||||||| |||||| || |||||| | | | || || |||||||||||||| Sbjct 34058 GAGAAGCTGGCGGATCCCACGCCCGAGGAGATGCAACGGGAGGCCCAGATGGAGGCGGAG 33999 Query 609 GTCTTTGCGGAGATCAAGAACGTGGAGAAGCTGCTAGCTCTGCTGAGCACTAGTTCGA-- 666 |||||||| |||||||||||||||||||||||||| | ||||||||| | |||| Sbjct 33998 GTCTTTGCCGAGATCAAGAACGTGGAGAAGCTGCTCACGCTGCTGAGCGC---CTCGAAC 33942 Query 667 ---GTGCCGACGCTAGG--GACAATGAGGAGAT 694 | |||| || ||| |||||||||||||| Sbjct 33941 ACGGGGCCG-CGAGAGGAAGACAATGAGGAGAT 33910 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 15945445651575