Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichoderma_20parareesei_20[genbank_20GCA_5F001050175.1_202015-07-
08] 885 sequences; 32,070,663 total letters
Query= NC_013699.1
Length=5018
Score E
Sequences producing significant alignments: (Bits) Value
seq403 196 2e-46
>seq403
Length=137200
Score = 196 bits (216), Expect = 2e-46
Identities = 245/333 (74%), Gaps = 11/333 (3%)
Strand=Plus/Minus
Query 369 TCTGGAACCACAGCAGCTACCGTCTCCCGCGTTCGCGCCCTTTACGACTTCACGCCCTCG 428
|| || || || || || || ||| | | ||||||||||| | |||||| |||| |
Sbjct 34238 TCCGGTACTACGGCTGCCACGGTCAGCAGGGTTCGCGCCCTCTTCGACTTTGTGCCCACC 34179
Query 429 GAACCCGGCGAGTTGGCTTTCCGCAAAGGCGACATTATTGCGGTTCTCGAGTCTGTGTAC 488
|| ||||||||| ||| ||| || || || | ||||| || | ||| ||||||
Sbjct 34178 GAGCCCGGCGAGCTGGAGTTCAAGAAGGGAGATGTCATTGCCGTGTTGGAGAGCGTGTAC 34119
Query 489 AAGGACTGGTGGAAGGGTTCTCTGCGTGGACAGACCGGCATCTTCCCCCTCAACTATGTC 548
|||||||||||| || || || | ||| |||| || |||||||| || || || |||
Sbjct 34118 AAGGACTGGTGGCGCGGCTCACTCAGGGGAAAGACGGGTATCTTCCCTCTGAATTACGTC 34059
Query 549 GAGAAGCTGCAGGATCCTACCAAGGAGGAGCTCGAGAGAGAAGCTCAGATGGAGGCGGAA 608
||||||||| |||||| || |||||| | | | || || ||||||||||||||
Sbjct 34058 GAGAAGCTGGCGGATCCCACGCCCGAGGAGATGCAACGGGAGGCCCAGATGGAGGCGGAG 33999
Query 609 GTCTTTGCGGAGATCAAGAACGTGGAGAAGCTGCTAGCTCTGCTGAGCACTAGTTCGA-- 666
|||||||| |||||||||||||||||||||||||| | ||||||||| | ||||
Sbjct 33998 GTCTTTGCCGAGATCAAGAACGTGGAGAAGCTGCTCACGCTGCTGAGCGC---CTCGAAC 33942
Query 667 ---GTGCCGACGCTAGG--GACAATGAGGAGAT 694
| |||| || ||| ||||||||||||||
Sbjct 33941 ACGGGGCCG-CGAGAGGAAGACAATGAGGAGAT 33910
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 15945445651575
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |