Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichoderma_20pleuroti_20[genbank_20GCA_5F001721665.1_202016-09-08]
2,355 sequences; 38,137,656 total letters
Query= NC_013699.1
Length=5018
Score E
Sequences producing significant alignments: (Bits) Value
seq1136 197 4e-47
>seq1136
Length=50156
Score = 197 bits (218), Expect = 4e-47
Identities = 244/331 (74%), Gaps = 7/331 (2%)
Strand=Plus/Plus
Query 369 TCTGGAACCACAGCAGCTACCGTCTCCCGCGTTCGCGCCCTTTACGACTTCACGCCCTCG 428
|| || ||||| || || || ||| | | || |||||||| | ||||| |||||| |
Sbjct 22504 TCAGGCACCACGGCTGCCACGGTCAGCAGGGTACGCGCCCTCTTTGACTTTACGCCCACC 22563
Query 429 GAACCCGGCGAGTTGGCTTTCCGCAAAGGCGACATTATTGCGGTTCTCGAGTCTGTGTAC 488
|| ||||||||| ||| ||| || || || | ||||| || || ||| || |||
Sbjct 22564 GAGCCCGGCGAGCTGGAATTCAAAAAGGGTGATGTCATTGCTGTGCTGGAGAGCGTCTAC 22623
Query 489 AAGGACTGGTGGAAGGGTTCTCTGCGTGGACAGACCGGCATCTTCCCCCTCAACTATGTC 548
||||| |||||| || || || ||| |||| |||||||| || |||||||| |||
Sbjct 22624 AAGGATTGGTGGCGTGGATCGCTCAAGGGAAAGACGGGCATCTTTCCTCTCAACTACGTC 22683
Query 549 GAGAAGCTGCAGGATCCTACCAAGGAGGAGCTCGAGAGAGAAGCTCAGATGGAGGCGGAA 608
||||||||| |||||| || |||||| | || |||| ||||||||||| |||||
Sbjct 22684 GAGAAGCTGGCGGATCCCACACCAGAGGAGATGCAGCGAGAGGCTCAGATGGAAGCGGAG 22743
Query 609 GTCTTTGCGGAGATCAAGAACGTGGAGAAGCTGCTAGCTCTGCTGAGCACTAGTTCGA-- 666
|| ||||| |||||||||||||| |||||||| ||| | ||| ||||| || | | |
Sbjct 22744 GTTTTTGCCGAGATCAAGAACGTAGAGAAGCTCCTAACGCTGTTGAGCGCT--TCCAACA 22801
Query 667 -GTGCCGACGCTAGG--GACAATGAGGAGAT 694
| | | ||| ||| ||||||||||||||
Sbjct 22802 CGGGACCACGGGAGGAAGACAATGAGGAGAT 22832
Score = 78.8 bits (86), Expect = 3e-11
Identities = 78/101 (77%), Gaps = 0/101 (0%)
Strand=Plus/Plus
Query 822 CAGATGATTTCACGCAGCTCAACGAGAAGTTCATCAAGGCACGCCGCGACTACGAAACCC 881
||||||| ||||| ||||||||||| |||||||||||||| || | ||||| ||| | |
Sbjct 23015 CAGATGACTTCACCCAGCTCAACGAAAAGTTCATCAAGGCTCGAAGAGACTATGAATCGC 23074
Query 882 TCCTTGAAGCCTCGATGTCGCAACCAGCGCAGCCCGGCTAC 922
| || ||| | || ||||| || || | |||| | ||||
Sbjct 23075 TGCTAGAATCGTCCATGTCTCATCCTCCCCAGCACAACTAC 23115
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 15945189276225
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |