Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichoderma_20reesei_20[genbank_20GCA_5F001999515.1_202017-02-13] 167 sequences; 32,472,817 total letters Query= NC_013699.1 Length=5018 Score E Sequences producing significant alignments: (Bits) Value seq145 201 4e-48 >seq145 Length=1412916 Score = 201 bits (222), Expect = 4e-48 Identities = 246/333 (74%), Gaps = 11/333 (3%) Strand=Plus/Plus Query 369 TCTGGAACCACAGCAGCTACCGTCTCCCGCGTTCGCGCCCTTTACGACTTCACGCCCTCG 428 || || || || || || || ||| | | ||||||||||| | |||||| |||| | Sbjct 1363607 TCCGGTACAACGGCTGCCACGGTCAGCAGGGTTCGCGCCCTCTTCGACTTTGTGCCCACC 1363666 Query 429 GAACCCGGCGAGTTGGCTTTCCGCAAAGGCGACATTATTGCGGTTCTCGAGTCTGTGTAC 488 || ||||||||| ||| ||| || || || | ||||| || | ||| |||||| Sbjct 1363667 GAGCCCGGCGAGCTGGAGTTCAAGAAGGGAGATGTCATTGCTGTGTTGGAGAGCGTGTAC 1363726 Query 489 AAGGACTGGTGGAAGGGTTCTCTGCGTGGACAGACCGGCATCTTCCCCCTCAACTATGTC 548 |||||||||||| || || || | ||| |||| || |||||||| || || || ||| Sbjct 1363727 AAGGACTGGTGGCGCGGCTCACTTAGGGGAAAGACGGGTATCTTCCCTCTGAATTACGTC 1363786 Query 549 GAGAAGCTGCAGGATCCTACCAAGGAGGAGCTCGAGAGAGAAGCTCAGATGGAGGCGGAA 608 ||||||||| |||||| || |||||| | | | || ||||||||||||||||| Sbjct 1363787 GAGAAGCTGGCGGATCCCACGCCCGAGGAGATGCAACGGGAGGCTCAGATGGAGGCGGAG 1363846 Query 609 GTCTTTGCGGAGATCAAGAACGTGGAGAAGCTGCTAGCTCTGCTGAGCACTAGTTCGA-- 666 |||||||| |||||||||||||||||||||||||| | ||||||||| | |||| Sbjct 1363847 GTCTTTGCCGAGATCAAGAACGTGGAGAAGCTGCTTACGCTGCTGAGCGC---CTCGAAC 1363903 Query 667 ---GTGCCGACGCTAGG--GACAATGAGGAGAT 694 | |||| || ||| |||||||||||||| Sbjct 1363904 ACGGGGCCG-CGAGAGGAAGACAATGAGGAGAT 1363935 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 15945570874365