Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichoderma_20virens_20[genbank_20GCA_5F001931985.1_202017-01-04] 197 sequences; 42,030,438 total letters Query= NC_013699.1 Length=5018 Score E Sequences producing significant alignments: (Bits) Value seq128 212 2e-51 >seq128 Length=1745744 Score = 212 bits (234), Expect = 2e-51 Identities = 219/287 (76%), Gaps = 0/287 (0%) Strand=Plus/Plus Query 369 TCTGGAACCACAGCAGCTACCGTCTCCCGCGTTCGCGCCCTTTACGACTTCACGCCCTCG 428 || || ||||| || || || ||| | | || |||||||| | ||||| || || | Sbjct 1490658 TCAGGTACCACGGCTGCCACGGTCAGCAGGGTACGCGCCCTCTTTGACTTTACCCCGACT 1490717 Query 429 GAACCCGGCGAGTTGGCTTTCCGCAAAGGCGACATTATTGCGGTTCTCGAGTCTGTGTAC 488 |||||||||||| ||| ||| || || || ||||||| || || ||| |||||| Sbjct 1490718 GAACCCGGCGAGCTGGAATTCAAGAAGGGTGATGTTATTGCTGTGCTGGAGAGCGTGTAC 1490777 Query 489 AAGGACTGGTGGAAGGGTTCTCTGCGTGGACAGACCGGCATCTTCCCCCTCAACTATGTC 548 ||||| |||||| || || || ||| |||| ||||||||||| ||||||||||| Sbjct 1490778 AAGGATTGGTGGCGTGGATCGCTCAAGGGAAAGACGGGCATCTTCCCTCTCAACTATGTT 1490837 Query 549 GAGAAGCTGCAGGATCCTACCAAGGAGGAGCTCGAGAGAGAAGCTCAGATGGAGGCGGAA 608 ||||||||| |||||| || |||||| | || |||| ||||||||||| ||||| Sbjct 1490838 GAGAAGCTGGCGGATCCCACACCAGAGGAGATGCAGCGAGAGGCTCAGATGGAAGCGGAG 1490897 Query 609 GTCTTTGCGGAGATCAAGAACGTGGAGAAGCTGCTAGCTCTGCTGAG 655 |||||||| ||||||||||||||||||||||| ||| | ||| |||| Sbjct 1490898 GTCTTTGCTGAGATCAAGAACGTGGAGAAGCTCCTAACGCTGTTGAG 1490944 Score = 89.7 bits (98), Expect = 2e-14 Identities = 156/225 (69%), Gaps = 8/225 (4%) Strand=Plus/Plus Query 702 CTGTACCACAAGACAGTGTCGATACGGCCGAAGTTGATCGAGCTCATTGGCAAGTATTCG 761 || || ||| |||| | | || ||||| ||| |||| |||| |||| |||||||| Sbjct 1491076 CTATATCACCAGACGCTTGCAATCCGGCCAAAGCTGATTAAGCTGATTGAGAAGTATTCT 1491135 Query 762 CAAAAGAAGGGTAAGTGGAATCTTTTACGCGAATTTGTGTGTTGGCCACTGATCGTGTTC 821 |||||||||||||| || ||| ||| | | | ||| || || | || Sbjct 1491136 CAAAAGAAGGGTAA-TGTCCGCTTCCACGAGCGTATCA---TTGCACAATGCTAACAATC 1491191 Query 822 ----CAGATGATTTCACGCAGCTCAACGAGAAGTTCATCAAGGCACGCCGCGACTACGAA 877 ||||||||||||| |||||||| || |||||||||||||| || | ||||| ||| Sbjct 1491192 AACGCAGATGATTTCACCCAGCTCAATGAAAAGTTCATCAAGGCTCGAAGAGACTATGAA 1491251 Query 878 ACCCTCCTTGAAGCCTCGATGTCGCAACCAGCGCAGCCCGGCTAC 922 | || || ||| | || ||||| || || | |||| | |||| Sbjct 1491252 TCGCTGCTAGAATCGTCCATGTCTCATCCTCCTCAGCACAACTAC 1491296 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 15945565642215