Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichophyton_20violaceum_20[genbank_20GCA_5F001651435.1_202016-05-
19] 261 sequences; 23,367,123 total letters
Query= NC_013699.1
Length=5018
Score E
Sequences producing significant alignments: (Bits) Value
seq23 282 1e-72
>seq23
Length=699274
Score = 282 bits (312), Expect = 1e-72
Identities = 639/949 (67%), Gaps = 50/949 (5%)
Strand=Plus/Minus
Query 9 AAGGCAAAGATCCTCGAGCGTATGGGTGAATGGACGGAGATGTTCGCCAGTAACCCTGAT 68
||| | ||||| || || | || | ||||||||||||||||| | ||||| |||||
Sbjct 330819 AAGTCGAAGATACTAGAACACATAGAGCAATGGACGGAGATGTTCTCTAGTAATCCTGAC 330760
Query 69 CTTGGCATCATGGAGCAGGCCTATATGAGGCTTAAGACACAAAGT--GCGTGTG--ATCA 124
|| || |||||||| || ||||| | | ||| ||| | || ||| || | | |||
Sbjct 330759 CTAGGGATCATGGAACAAGCCTACCTTAAGCTCAAGTCTCAGAGTAAGCCTCTTGCATCG 330700
Query 125 A---CTCTG----GTTCG--------TTGGGAGCACTGACCAACGTGTTGTAGACCCTAA 169
|| || || || |||| | | | | |||| | | |||||| ||
Sbjct 330699 GTCTCTTTGAAAAGTGCGACCTCCGATTGGTTTC-CGGGCTAACGGGCCGCAGACCCAAA 330641
Query 170 CCTGCGACCTCCGTCGAAACCTCAGAAGACCCAGATCACGGACTCGGACCGCCAGAAGGA 229
||| | ||| ||||| ||||| ||| | || || || | |||| | | |||||
Sbjct 330640 CCTTCAACCCCCGTCCAAACCGACCAAGCGGGAAATAACAGAGTTGGACAGACTAAAGGA 330581
Query 230 AGAGGAGGAGCTACAGATGGCGCTGGCACTCTCCGTCAAGGAAAG------CGGGACCGA 283
|| || ||||| |||||||| || || || ||||||||||| | || |||||
Sbjct 330580 GGAAGAAGAGCTGCAGATGGCCCTTGCGCTGTCCGTCAAGGATAAACAACCCGCCACCGA 330521
Query 284 ------GCCATCCGCCGCCAGGTCCAACCAGCCGCAAGCAAAAGCCCCACAACAATCCGC 337
|||||| | | |||| ||||| ||||| || || || |||
Sbjct 330520 ACAGCAGCCATCAAACAGCGAGTCCTTCCAGC---AAGCATCTGCTGCAGAAGGGTCCAA 330464
Query 338 CCCGGAA-CAAGAGC--AGCATCAAGCTATTGCATCTGGAACCACAGCAGCTACCGTCTC 394
| | | | | | | | | | ||| |||||||| || ||||| || || ||||||||
Sbjct 330463 TACTGCATCTACATCTCAACCTACAGCCATTGCATCGGGTACCACGGCCGCCACCGTCTC 330404
Query 395 CCGCGTTCGCGCCCTTTACGACTTCACGCCCTCGGAACCCGGCGAGTTGGCTTTCCGCAA 454
|| ||||| || | |||||||| ||||||||| || |||||| | ||||| ||
Sbjct 330403 TCGGGTTCGAGCATTATACGACTTTCAGCCCTCGGAGCCAGGCGAGCTTCAGTTCCGAAA 330344
Query 455 AGGCGACATTATTGCGGTTCTCGAGTCTGTGTACAAGGACTGGTGGAAGGGTTCTCTGCG 514
|||| | || || ||||| || || ||||||||||| ||||||||||||||||| ||
Sbjct 330343 GAGCGATGTCATCGCTGTTCTGGAATCGGTGTACAAGGATTGGTGGAAGGGTTCTCTCCG 330284
Query 515 TGGACAGACCGGCATCTTCCCCCTCAACTATGTCGAGAAGCTGCAGGATCCTACCAAGGA 574
|| ||||||||||||||||| | |||||||| ||||| || |||||| ||| ||||
Sbjct 330283 CGGCCAGACCGGCATCTTCCCTTTGAACTATGTTGAGAAACTCTCGGATCCCACCCAGGA 330224
Query 575 GGAGCTCGAGAGAGAAGCTCAGATGGAGGCGGAAGTCTTTGCGGAGATCAAGAACGTGGA 634
|| || || | || || |||||||| || || || ||||||||||||||||| || ||
Sbjct 330223 AGAACTTCAGCGGGAGGCGCAGATGGAAGCAGAGGTGTTTGCGGAGATCAAGAATGTCGA 330164
Query 635 GAAGCTGCTAGCTCTGCTGAGCACTAGT---TCGAGTGCCGACGCTAGGGACAATGAGGA 691
||| |||| || || || ||||| ||| ||| | | ||| || |||||
Sbjct 330163 GAAATTGCTGGCCCTCCTCAGCACGAGTAACTCGGAACTAAATGTGCAGGAAAACGAGGA 330104
Query 692 GATCACTTCGCTGTACCACAAGACAGTGTCGATACGGCCGAAGTTGATCGAGCTCATTGG 751
|| || | || ||||| || | | || || |||||| |||||||| | || ||
Sbjct 330103 AATTACCACCCTCTACCATTCTACTCTAGCCATTCGACCGAAGCTGATCGAGTTGATCGG 330044
Query 752 CAAGTATTCGCAAAAGAAGGGTAAGTGGAATCT---TTTACGCGAATTTGTGTG--TTGG 806
|||||| || | ||||| |||| || | ||| ||| | || | | | |
Sbjct 330043 CAAGTACTCCAAGAAGAAAGGTATGTCG--TCTGGGTTTCCTATGATACGAGGGGATATC 329986
Query 807 CCACTGATCGTGTTCCAGATGATTTCACGCAGCTCAACGAGAAGTTCATCAAGGCACGCC 866
||| || ||| |||||| || ||||| | || || ||||||||||| || || |
Sbjct 329985 GAACTAAT-GTG-AATAGATGACTTTACGCAATTAAATGAAAAGTTCATCAAAGCTCGTC 329928
Query 867 GCGACTACGAAACCCTCCTTGAAGCCTCGATGTCGCAACCAGCGCAGCC 915
| || |||||| | || |||||| | || ||| |||| || | |||||
Sbjct 329927 GGGATTACGAAGCTCTGCTTGAATCTTCAATGGCGCATCCTGGTCAGCC 329879
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 15945554480295
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |