Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichophyton_20violaceum_20[genbank_20GCA_5F001651435.1_202016-05- 19] 261 sequences; 23,367,123 total letters Query= NC_013699.1 Length=5018 Score E Sequences producing significant alignments: (Bits) Value seq23 282 1e-72 >seq23 Length=699274 Score = 282 bits (312), Expect = 1e-72 Identities = 639/949 (67%), Gaps = 50/949 (5%) Strand=Plus/Minus Query 9 AAGGCAAAGATCCTCGAGCGTATGGGTGAATGGACGGAGATGTTCGCCAGTAACCCTGAT 68 ||| | ||||| || || | || | ||||||||||||||||| | ||||| ||||| Sbjct 330819 AAGTCGAAGATACTAGAACACATAGAGCAATGGACGGAGATGTTCTCTAGTAATCCTGAC 330760 Query 69 CTTGGCATCATGGAGCAGGCCTATATGAGGCTTAAGACACAAAGT--GCGTGTG--ATCA 124 || || |||||||| || ||||| | | ||| ||| | || ||| || | | ||| Sbjct 330759 CTAGGGATCATGGAACAAGCCTACCTTAAGCTCAAGTCTCAGAGTAAGCCTCTTGCATCG 330700 Query 125 A---CTCTG----GTTCG--------TTGGGAGCACTGACCAACGTGTTGTAGACCCTAA 169 || || || || |||| | | | | |||| | | |||||| || Sbjct 330699 GTCTCTTTGAAAAGTGCGACCTCCGATTGGTTTC-CGGGCTAACGGGCCGCAGACCCAAA 330641 Query 170 CCTGCGACCTCCGTCGAAACCTCAGAAGACCCAGATCACGGACTCGGACCGCCAGAAGGA 229 ||| | ||| ||||| ||||| ||| | || || || | |||| | | ||||| Sbjct 330640 CCTTCAACCCCCGTCCAAACCGACCAAGCGGGAAATAACAGAGTTGGACAGACTAAAGGA 330581 Query 230 AGAGGAGGAGCTACAGATGGCGCTGGCACTCTCCGTCAAGGAAAG------CGGGACCGA 283 || || ||||| |||||||| || || || ||||||||||| | || ||||| Sbjct 330580 GGAAGAAGAGCTGCAGATGGCCCTTGCGCTGTCCGTCAAGGATAAACAACCCGCCACCGA 330521 Query 284 ------GCCATCCGCCGCCAGGTCCAACCAGCCGCAAGCAAAAGCCCCACAACAATCCGC 337 |||||| | | |||| ||||| ||||| || || || ||| Sbjct 330520 ACAGCAGCCATCAAACAGCGAGTCCTTCCAGC---AAGCATCTGCTGCAGAAGGGTCCAA 330464 Query 338 CCCGGAA-CAAGAGC--AGCATCAAGCTATTGCATCTGGAACCACAGCAGCTACCGTCTC 394 | | | | | | | | | | ||| |||||||| || ||||| || || |||||||| Sbjct 330463 TACTGCATCTACATCTCAACCTACAGCCATTGCATCGGGTACCACGGCCGCCACCGTCTC 330404 Query 395 CCGCGTTCGCGCCCTTTACGACTTCACGCCCTCGGAACCCGGCGAGTTGGCTTTCCGCAA 454 || ||||| || | |||||||| ||||||||| || |||||| | ||||| || Sbjct 330403 TCGGGTTCGAGCATTATACGACTTTCAGCCCTCGGAGCCAGGCGAGCTTCAGTTCCGAAA 330344 Query 455 AGGCGACATTATTGCGGTTCTCGAGTCTGTGTACAAGGACTGGTGGAAGGGTTCTCTGCG 514 |||| | || || ||||| || || ||||||||||| ||||||||||||||||| || Sbjct 330343 GAGCGATGTCATCGCTGTTCTGGAATCGGTGTACAAGGATTGGTGGAAGGGTTCTCTCCG 330284 Query 515 TGGACAGACCGGCATCTTCCCCCTCAACTATGTCGAGAAGCTGCAGGATCCTACCAAGGA 574 || ||||||||||||||||| | |||||||| ||||| || |||||| ||| |||| Sbjct 330283 CGGCCAGACCGGCATCTTCCCTTTGAACTATGTTGAGAAACTCTCGGATCCCACCCAGGA 330224 Query 575 GGAGCTCGAGAGAGAAGCTCAGATGGAGGCGGAAGTCTTTGCGGAGATCAAGAACGTGGA 634 || || || | || || |||||||| || || || ||||||||||||||||| || || Sbjct 330223 AGAACTTCAGCGGGAGGCGCAGATGGAAGCAGAGGTGTTTGCGGAGATCAAGAATGTCGA 330164 Query 635 GAAGCTGCTAGCTCTGCTGAGCACTAGT---TCGAGTGCCGACGCTAGGGACAATGAGGA 691 ||| |||| || || || ||||| ||| ||| | | ||| || ||||| Sbjct 330163 GAAATTGCTGGCCCTCCTCAGCACGAGTAACTCGGAACTAAATGTGCAGGAAAACGAGGA 330104 Query 692 GATCACTTCGCTGTACCACAAGACAGTGTCGATACGGCCGAAGTTGATCGAGCTCATTGG 751 || || | || ||||| || | | || || |||||| |||||||| | || || Sbjct 330103 AATTACCACCCTCTACCATTCTACTCTAGCCATTCGACCGAAGCTGATCGAGTTGATCGG 330044 Query 752 CAAGTATTCGCAAAAGAAGGGTAAGTGGAATCT---TTTACGCGAATTTGTGTG--TTGG 806 |||||| || | ||||| |||| || | ||| ||| | || | | | | Sbjct 330043 CAAGTACTCCAAGAAGAAAGGTATGTCG--TCTGGGTTTCCTATGATACGAGGGGATATC 329986 Query 807 CCACTGATCGTGTTCCAGATGATTTCACGCAGCTCAACGAGAAGTTCATCAAGGCACGCC 866 ||| || ||| |||||| || ||||| | || || ||||||||||| || || | Sbjct 329985 GAACTAAT-GTG-AATAGATGACTTTACGCAATTAAATGAAAAGTTCATCAAAGCTCGTC 329928 Query 867 GCGACTACGAAACCCTCCTTGAAGCCTCGATGTCGCAACCAGCGCAGCC 915 | || |||||| | || |||||| | || ||| |||| || | ||||| Sbjct 329927 GGGATTACGAAGCTCTGCTTGAATCTTCAATGGCGCATCCTGGTCAGCC 329879 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 15945554480295