Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tuber_20melanosporum_20[genbank_20GCA_5F000151645.1_202010-05-03] 398 sequences; 124,945,702 total letters Query= NC_013699.1 Length=5018 Score E Sequences producing significant alignments: (Bits) Value seq221 210 7e-51 >seq221 Length=985840 Score = 210 bits (232), Expect = 7e-51 Identities = 247/328 (75%), Gaps = 7/328 (2%) Strand=Plus/Minus Query 375 ACCACAGCAGCTACCGTCTCCCGCGTTCGCGCCCTTTACGACTTCACGCCCTCGGAACCC 434 ||||| || ||||| ||||| || || || || || | ||| ||| || || ||| | Sbjct 592821 ACCACGGCTGCTACTGTCTCGCGAGTCCGTGCTCTCTTCGATTTCGTTCCTTCTGAAGCT 592762 Query 435 GGCGAGTTGGCTTTCCGCAAAGGCGACATTATTGCGGTTCTCGAGTCTGTGTACAAGGAC 494 || ||| | ||||| | |||||||| ||||| || || ||||||||||| |||||||| Sbjct 592761 GGAGAGCTTGCTTTTAGGAAAGGCGATATTATCGCCGTGCTCGAGTCTGTCTACAAGGAT 592702 Query 495 TGGTGGAAGGGTTCTCTGCGTGGACAGACCGGCATCTTCCCCCTCAACTATGTCGAGAAG 554 ||||||||||| ||| | || || |||||||| || ||||| | |||||||| ||||| Sbjct 592701 TGGTGGAAGGGCTCTTTACGAGGCCAGACCGGAATTTTCCCGTTAAACTATGTTGAGAAA 592642 Query 555 CTGCAGGATCCTAC-CAAGGAGGAGCTCGAGAGAGAAGCTCAGATGGAGGCGGAAGTCTT 613 | ||||||||| | | || || || | || || || ||||||||||| || || || Sbjct 592641 TTATCGGATCCTACTCCTGAAGAAGTTCAA-AGGGAGGCGCAGATGGAGGCAGAGGTTTT 592583 Query 614 TGCGGAGATCAAGAACGTGGAGAAGCTGCTAGCTCTGCTGAGCACT---AGT-TCGAGTG 669 || ||||| ||||| |||||||||||||||||||| |||| ||| ||| | || | Sbjct 592582 CGCTGAGATTAAGAATGTGGAGAAGCTGCTAGCTCTATTGAGTACTACCAGTGTAGA-TA 592524 Query 670 CCGACGCTAGGGACAATGAGGAGATCAC 697 || | | | ||| ||||||||||| || Sbjct 592523 CCAATGTTCAGGATAATGAGGAGATTAC 592496 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 15945530586810