Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ustilaginoidea_20virens_20[genbank_20GCA_5F000965225.2_202016-01-29]
139 sequences; 33,567,624 total letters
Query= NC_013699.1
Length=5018
Score E
Sequences producing significant alignments: (Bits) Value
seq11 156 1e-34
>seq11
Length=720835
Score = 156 bits (172), Expect = 1e-34
Identities = 209/291 (72%), Gaps = 0/291 (0%)
Strand=Plus/Plus
Query 365 TGCATCTGGAACCACAGCAGCTACCGTCTCCCGCGTTCGCGCCCTTTACGACTTCACGCC 424
|||| | || || || || || || ||| | | || || | ||| |||||||| ||
Sbjct 526475 TGCAGCAGGTACGACGGCCGCAACAGTCAGCAGAGTGCGTGGCCTGTACGACTTTGTCCC 526534
Query 425 CTCGGAACCCGGCGAGTTGGCTTTCCGCAAAGGCGACATTATTGCGGTTCTCGAGTCTGT 484
|| || | |||||| | | ||| || || ||| | ||||| || || || || ||
Sbjct 526535 GTCAGAGGCTGGCGAGCTCGAGTTCAAGAAGGGAGACGTCATTGCCGTGCTGGAATCCGT 526594
Query 485 GTACAAGGACTGGTGGAAGGGTTCTCTGCGTGGACAGACCGGCATCTTCCCCCTCAACTA 544
||||||||||||||| || || || || |||| ||||| ||||| ||||||||
Sbjct 526595 ATACAAGGACTGGTGGCGAGGCTCCTTGAAGGGCAAGACGGGCATTTTCCCGCTCAACTA 526654
Query 545 TGTCGAGAAGCTGCAGGATCCTACCAAGGAGGAGCTCGAGAGAGAAGCTCAGATGGAGGC 604
|||||| ||||| ||||| || || ||||| | | || || |||||||| ||
Sbjct 526655 TGTCGAAAAGCTCACAGATCCCACTCCCGACGAGCTGCACAAGGAGGCCCAGATGGAAGC 526714
Query 605 GGAAGTCTTTGCGGAGATCAAGAACGTGGAGAAGCTGCTAGCTCTGCTGAG 655
|| |||||||| |||||||||||||| ||||||||||| | ||||||||
Sbjct 526715 CGAGGTCTTTGCCGAGATCAAGAACGTCGAGAAGCTGCTCACCCTGCTGAG 526765
Score = 84.2 bits (92), Expect = 7e-13
Identities = 79/101 (78%), Gaps = 0/101 (0%)
Strand=Plus/Plus
Query 822 CAGATGATTTCACGCAGCTCAACGAGAAGTTCATCAAGGCACGCCGCGACTACGAAACCC 881
|||| || ||||| |||||||| || ||||||||||||||||| | |||||||| | |
Sbjct 527100 CAGACGACTTCACCCAGCTCAATGAAAAGTTCATCAAGGCACGAAGAGACTACGAGGCTC 527159
Query 882 TCCTTGAAGCCTCGATGTCGCAACCAGCGCAGCCCGGCTAC 922
|||| ||| | || |||||||| || | |||| | ||||
Sbjct 527160 TCCTGGAATCATCCATGTCGCATCCGCCTCAGCACAACTAC 527200
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 15945575757705
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |