Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Valsa_20mali_20var._20pyri_20[genbank_20GCA_5F000813385.1_202015-01- 05] 475 sequences; 35,730,243 total letters Query= NC_013699.1 Length=5018 Score E Sequences producing significant alignments: (Bits) Value seq171 293 7e-76 >seq171 Length=48649 Score = 293 bits (324), Expect = 7e-76 Identities = 415/574 (72%), Gaps = 16/574 (3%) Strand=Plus/Plus Query 361 CTATTGCATCTGGAACCACAGCAGCTACCGTCTCCCGCGTTCGCGCCCTTTACGACTTCA 420 |||| | ||||||||||| || || || ||| ||| || || ||||| |||||||| Sbjct 34590 CTATGCCGTCTGGAACCACGGCGGCGACGGTCAGCCGGGTGCGGGCCCTCTACGACTTTG 34649 Query 421 CGCCCTCGGAACCCGGCGAGTTGGCTTTCCGCAAAGGCGACATTATTGCGGTTCTCGAGT 480 |||||| || || |||||| ||| ||| | ||||| | || || || || ||| Sbjct 34650 TGCCCTCCGAGCCGGGCGAGCTGGAGTTCAAGAGGGGCGATGTCATCGCCGTGCTGGAGA 34709 Query 481 CTGTGTACAAGGACTGGTGGAAGGGTTCTCTGCGTGGACAGACCGGCATCTTCCCCCTCA 540 |||||||||||||||||| || || || || |||| ||||||||||| || | Sbjct 34710 GCGTGTACAAGGACTGGTGGCGTGGGTCCTTGAAGGGCAAGACGGGCATCTTCCCGCTGA 34769 Query 541 ACTATGTCGAGAAGCTGCAGGATCCTACCAAGGAGGAGCTCGAGAGAGAAGCTCAGATGG 600 |||| |||||||||||| || || || || ||||| || | || || ||||||| Sbjct 34770 ACTACGTCGAGAAGCTGACAGACCCGACGCCCGATGAGCTACAGCGCGAGGCGCAGATGG 34829 Query 601 AGGCGGAAGTCTTTGCGGAGATCAAGAACGTGGAGAAGCTGCTAGCTCTGCTGAGCACTA 660 |||| || || ||||| |||||||||||||| |||||| || | | || ||||||| | Sbjct 34830 AGGCCGAGGTTTTTGCCGAGATCAAGAACGTCGAGAAGTTGTTGACGCTATTGAGCACGA 34889 Query 661 GTTCGAGTGCCGACGCTAG--GGACAATGAGGAGATCACTTCGCTGTACCACAAGACAGT 718 | | | |||| || || ||| |||||||||||| || |||||| || |||| | Sbjct 34890 -ATAGTGCGCCG-CGGGAGGAGGATAATGAGGAGATCTCTAAGCTGTATCATCAGACGTT 34947 Query 719 GTCGATACGGCCGAAGTTGATCGAGCTCATTGGCAAGTATTCGCAAAAGAAGGGTAAG-- 776 |||| || || ||||||||| || | |||| ||||| ||||||||||| |||||| Sbjct 34948 AGCGATCCGCCCCAAGTTGATCAAGTTGATTGAGAAGTACTCGCAAAAGAAAGGTAAGCA 35007 Query 777 TGG---AATCTTTTACGCGAATTT-GTGTGT-TGGCCACTGAT---CGTGTTCCAGATGA 828 ||| | || | | | | ||| | |||| || |||||| | || ||||||| Sbjct 35008 TGGCTATAGCTGTAGCACAAGTTTGGGGTGTATGTTTACTGATATACATG--ACAGATGA 35065 Query 829 TTTCACGCAGCTCAACGAGAAGTTCATCAAGGCACGCCGCGACTACGAAACCCTCCTTGA 888 |||||| || ||||||||||||||||||||||| || | |||||||| | | | || Sbjct 35066 TTTCACACAACTCAACGAGAAGTTCATCAAGGCGCGGAGGGACTACGAGGCATTGTTGGA 35125 Query 889 AGCCTCGATGTCGCAACCAGCGCAGCCCGGCTAC 922 |||| |||||||| || | |||||| ||||| Sbjct 35126 GTCCTCCATGTCGCATCCCCCACAGCCCAGCTAC 35159 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 15945517157625