Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Valsa_20mali_20var._20pyri_20[genbank_20GCA_5F000813385.1_202015-01-
05] 475 sequences; 35,730,243 total letters
Query= NC_013699.1
Length=5018
Score E
Sequences producing significant alignments: (Bits) Value
seq171 293 7e-76
>seq171
Length=48649
Score = 293 bits (324), Expect = 7e-76
Identities = 415/574 (72%), Gaps = 16/574 (3%)
Strand=Plus/Plus
Query 361 CTATTGCATCTGGAACCACAGCAGCTACCGTCTCCCGCGTTCGCGCCCTTTACGACTTCA 420
|||| | ||||||||||| || || || ||| ||| || || ||||| ||||||||
Sbjct 34590 CTATGCCGTCTGGAACCACGGCGGCGACGGTCAGCCGGGTGCGGGCCCTCTACGACTTTG 34649
Query 421 CGCCCTCGGAACCCGGCGAGTTGGCTTTCCGCAAAGGCGACATTATTGCGGTTCTCGAGT 480
|||||| || || |||||| ||| ||| | ||||| | || || || || |||
Sbjct 34650 TGCCCTCCGAGCCGGGCGAGCTGGAGTTCAAGAGGGGCGATGTCATCGCCGTGCTGGAGA 34709
Query 481 CTGTGTACAAGGACTGGTGGAAGGGTTCTCTGCGTGGACAGACCGGCATCTTCCCCCTCA 540
|||||||||||||||||| || || || || |||| ||||||||||| || |
Sbjct 34710 GCGTGTACAAGGACTGGTGGCGTGGGTCCTTGAAGGGCAAGACGGGCATCTTCCCGCTGA 34769
Query 541 ACTATGTCGAGAAGCTGCAGGATCCTACCAAGGAGGAGCTCGAGAGAGAAGCTCAGATGG 600
|||| |||||||||||| || || || || ||||| || | || || |||||||
Sbjct 34770 ACTACGTCGAGAAGCTGACAGACCCGACGCCCGATGAGCTACAGCGCGAGGCGCAGATGG 34829
Query 601 AGGCGGAAGTCTTTGCGGAGATCAAGAACGTGGAGAAGCTGCTAGCTCTGCTGAGCACTA 660
|||| || || ||||| |||||||||||||| |||||| || | | || ||||||| |
Sbjct 34830 AGGCCGAGGTTTTTGCCGAGATCAAGAACGTCGAGAAGTTGTTGACGCTATTGAGCACGA 34889
Query 661 GTTCGAGTGCCGACGCTAG--GGACAATGAGGAGATCACTTCGCTGTACCACAAGACAGT 718
| | | |||| || || ||| |||||||||||| || |||||| || |||| |
Sbjct 34890 -ATAGTGCGCCG-CGGGAGGAGGATAATGAGGAGATCTCTAAGCTGTATCATCAGACGTT 34947
Query 719 GTCGATACGGCCGAAGTTGATCGAGCTCATTGGCAAGTATTCGCAAAAGAAGGGTAAG-- 776
|||| || || ||||||||| || | |||| ||||| ||||||||||| ||||||
Sbjct 34948 AGCGATCCGCCCCAAGTTGATCAAGTTGATTGAGAAGTACTCGCAAAAGAAAGGTAAGCA 35007
Query 777 TGG---AATCTTTTACGCGAATTT-GTGTGT-TGGCCACTGAT---CGTGTTCCAGATGA 828
||| | || | | | | ||| | |||| || |||||| | || |||||||
Sbjct 35008 TGGCTATAGCTGTAGCACAAGTTTGGGGTGTATGTTTACTGATATACATG--ACAGATGA 35065
Query 829 TTTCACGCAGCTCAACGAGAAGTTCATCAAGGCACGCCGCGACTACGAAACCCTCCTTGA 888
|||||| || ||||||||||||||||||||||| || | |||||||| | | | ||
Sbjct 35066 TTTCACACAACTCAACGAGAAGTTCATCAAGGCGCGGAGGGACTACGAGGCATTGTTGGA 35125
Query 889 AGCCTCGATGTCGCAACCAGCGCAGCCCGGCTAC 922
|||| |||||||| || | |||||| |||||
Sbjct 35126 GTCCTCCATGTCGCATCCCCCACAGCCCAGCTAC 35159
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 15945517157625
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |