Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Venturia_20inaequalis_20[genbank_20GCA_5F002148275.1_202017-05-17] 1,040 sequences; 62,487,368 total letters Query= NC_013699.1 Length=5018 Score E Sequences producing significant alignments: (Bits) Value seq753 389 1e-104 >seq753 Length=229050 Score = 389 bits (430), Expect = 1e-104 Identities = 653/932 (70%), Gaps = 37/932 (4%) Strand=Plus/Plus Query 9 AAGGCAAAGATCCTCGAGCGTATGGGTGAATGGACGGAGATGTTCGCCAGTAACCCTGAT 68 ||| ||||||| || ||||| |||| |||||||| ||||||||| ||| | ||||| Sbjct 49766 AAGACAAAGATACTGGAGCGCATGGAAGAATGGACTGAGATGTTCTCCAAAGATCCTGAC 49825 Query 69 CTTGGCATCATGGAGCAGGCCTATATGAGGCTTAAGACACAAAGTGCGTGTGATCAACTC 128 | ||||| ||||| ||||| || |||||| | |||||||||||| | || || | Sbjct 49826 TTGGGCATAATGGAACAGGCATACATGAGGTTGAAGACACAAAGTAGGAATGC-CAGTAC 49884 Query 129 TGGTTCGTTGGGAGCACTGACCAACGTGTTGTAGACCCTAACCTGCGACCTCCGTCGAAA 188 |||| || | | | ||| ||| ||| || ||||| | ||||| |||||| Sbjct 49885 TGGTAAAC---GATCGATTCCTAACAGCTTGCAGATCCGAACCTCCACCCTCCCTCGAAA 49941 Query 189 CCTCAGAAGACCCAGATCACGGACTCGGACCGCCAGAAGGAAGAGGAGGAGCTACAGATG 248 || || ||||| ||| | | || ||| ||| |||||| |||| ||||| ||| Sbjct 49942 CCGCAAAAGACACAGCTTTCAGATCAAGACAAACAGCGAGAAGAGCAGGAACTACAAATG 50001 Query 249 GCGCTGGCACTCTCCGTCAAGGAAAGCGGGACCGAGCCATCC---GCCGCCAGGTCCAAC 305 || || || || ||| | ||||| | | ||||| || | || |||| ||| ||| Sbjct 50002 GCACTCGCCCTGTCCATGAAGGAGAACAAGACCGCAACACCACAGGCAGCCACGTCGAAC 50061 Query 306 CAGCCGCAA------GCAAAAGCCCCA----CAACAATC-CGCC-CCGGAACAAGAGCAG 353 || || ||| ||| |||| || | || || ||| || |||| | ||| Sbjct 50062 CAACCTCAATCATCAGCACAAGCTGCAGCTGCGCCAGTCTCGCAGCCTCCACAACAACAG 50121 Query 354 CATCAAGCTATTGCATCTGGAACCACAGCAGCTACCGTCTCCCGCGTTCGCGCCCTTTAC 413 | | | | | ||||| ||||| ||||| || || | || |||||| | | | Sbjct 50122 ACCCCACCCGCAGTACAAGGAACGACAGCTGCTACAGTATCAAGAGTACGCGCCTTGTTC 50181 Query 414 GACTTCACGCCCTCGGAACCCGGCGAGTTGGCTTTCCGCAAAGGCGACATTATTGCGGTT 473 || || || ||||| ||| | ||||| || | ||||| || ||||| || || || || Sbjct 50182 GATTTTACACCCTCAGAATCTGGCGAACTGTCATTCCGAAAGGGCGATATAATAGCAGTA 50241 Query 474 CTCGAGTCTGTGTACAAGGACTGGTGGAAGGGTTCTCTGCGTGGACAGACCGGCATCTTC 533 || || || |||| ||||||||||||||| || || |||| ||||| |||||||| ||| Sbjct 50242 CTAGAATCAGTGTTCAAGGACTGGTGGAAAGGCTCATTGCGCGGACAAACCGGCATTTTC 50301 Query 534 CCCCTCAACTATGTCGAGAAGCTGCAGGATCCTACCAAGGAGGAGCTCGAGAGAGAAGCT 593 || ||||| ||||||||||||||||||||||| || | || ||||| || | || ||| Sbjct 50302 CCGCTCAATTATGTCGAGAAGCTGCAGGATCCAACGACTGAAGAGCTGGAACGTGAGGCT 50361 Query 594 CAGATGGAGGCGGAAGTCTTTGCGGAGATCAAGAACGTGGAGAAGCTGCTAGCTCTGCTG 653 || ||||| || || || ||||| |||| ||||||||||||||| |||| ||||| Sbjct 50362 CACATGGAAGCCGATGTGTTTGCTCAGATTGGCAACGTGGAGAAGCTGTTAGCGTTGCTG 50421 Query 654 AGCACTAGT----TCG--AGTGCCGACGCTAGGGACAATGAGGAGATCACTTCGCTGTAC 707 ||||| | | || || | ||| | |||||||||||||||||||| ||| ||| Sbjct 50422 AGCACGAATGATACCGGCAGAGGCGATGTGAGGGACAATGAGGAGATCACAGAGCTTTAC 50481 Query 708 CACAAGACAGTGTCGATACGGCCGAAGTTGATCGAGCTCATTGGCAAGTATTCGCAAAAG 767 ||| || || |||| ||||||||||||||||| | |||||||| || ||||| ||| Sbjct 50482 CACTCAACCTTGGCGATTCGGCCGAAGTTGATCGAATTGATTGGCAAATACTCGCAGAAG 50541 Query 768 AAGGGTAAGTGGAATCTTTTACGCGAATTTGTGTGTTGGC----CACTGATCGTGTTCCA 823 || ||| | | || | | ||| | | | | || | ||| | | || || Sbjct 50542 AAAGGTTA--GCAAGC-TCTAC---ATCTCCTCTAGTGACGCAAAACT-AACATG-AACA 50593 Query 824 GATGATTTCACGCAGCTCAACGAGAAGTTCATCAAGGCACGCCGCGACTACGAAACCCTC 883 || || ||||| ||||| ||||| ||||||||||| ||||| || || || |||| || Sbjct 50594 GACGACTTCACCCAGCTAAACGAAAAGTTCATCAAAGCACGTCGAGATTATGAAATGCTT 50653 Query 884 CTTGAAGCCTCGATGTCGCAACCAGCGCAGCC 915 || ||| |||| |||||||| || | ||||| Sbjct 50654 CTCGAATCCTCCATGTCGCATCCTCCACAGCC 50685 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 15945418618800