Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Venturia_20inaequalis_20[genbank_20GCA_5F002148295.1_202016-10-31] 1,680 sequences; 40,142,277 total letters Query= NC_013699.1 Length=5018 Score E Sequences producing significant alignments: (Bits) Value seq1183 383 5e-103 >seq1183 Length=68701 Score = 383 bits (424), Expect = 5e-103 Identities = 653/934 (70%), Gaps = 37/934 (4%) Strand=Plus/Plus Query 9 AAGGCAAAGATCCTCGAGCGTATGGGTGAATGGACGGAGATGTTCGCCAGTAACCCTGAT 68 ||| ||||||| || ||||| |||| |||||||| ||||||||| ||| | ||||| Sbjct 38742 AAGACAAAGATACTGGAGCGCATGGAAGAATGGACTGAGATGTTCTCCAAAGATCCTGAC 38801 Query 69 CTTGGCATCATGGAGCAGGCCTATATGAGGCTTAAGACACAAAGTGCGTGTGATCAACTC 128 | ||||| ||||| ||||| || |||||| | |||||||||||| | || || | Sbjct 38802 TTGGGCATAATGGAACAGGCATACATGAGGTTGAAGACACAAAGTAGGAATGC-CAGTAC 38860 Query 129 TGGTTCGTTGGGAGCACTGACCAACGTGTTGTAGACCCTAACCTGCGACCTCCGTCGAAA 188 |||| || | | | ||| | | ||| || ||||| | ||||| |||||| Sbjct 38861 TGGTAAAC---GATCGATTCCTAACAGCTCGCAGATCCGAACCTCCACCCTCCCTCGAAA 38917 Query 189 CCTCAGAAGACCCAGATCACGGACTCGGACCGCCAGAAGGAAGAGGAGGAGCTACAGATG 248 || || ||||| ||| | | || ||| ||| |||||| |||| ||||| ||| Sbjct 38918 CCGCAAAAGACACAGCTTTCAGATCAAGACAAACAGCGAGAAGAGCAGGAACTACAAATG 38977 Query 249 GCGCTGGCACTCTCCGTCAAGGAAAGCGGGACCGAGCCATCC---GCCGCCAGGTCCAAC 305 || || || || ||| | ||||| | | ||||| || | || |||| || ||| Sbjct 38978 GCACTCGCCCTGTCCATGAAGGAGAACAAGACCGCAACACCACAGGCAGCCACATCGAAC 39037 Query 306 CAGCCGCAA------GCAAAAGCCCCA----CAACAATC-CGCC-CCGGAACAAGAGCAG 353 || || ||| ||| |||| || | || || ||| || |||| | ||| Sbjct 39038 CAACCTCAATCATCAGCACAAGCTGCAGCTGCGCCAGTCTCGCAGCCTCCACAACAACAG 39097 Query 354 CATCAAGCTATTGCATCTGGAACCACAGCAGCTACCGTCTCCCGCGTTCGCGCCCTTTAC 413 | | | | | ||||| ||||| ||||| || || | || |||||| | | | Sbjct 39098 ACCCCACCCGCAGTACAAGGAACGACAGCTGCTACAGTATCAAGAGTACGCGCCTTGTTC 39157 Query 414 GACTTCACGCCCTCGGAACCCGGCGAGTTGGCTTTCCGCAAAGGCGACATTATTGCGGTT 473 || || || ||||| ||| | ||||| || | ||||| || ||||| || || || || Sbjct 39158 GATTTTACACCCTCAGAATCTGGCGAACTGTCATTCCGAAAGGGCGATATAATAGCAGTA 39217 Query 474 CTCGAGTCTGTGTACAAGGACTGGTGGAAGGGTTCTCTGCGTGGACAGACCGGCATCTTC 533 || || || |||| ||||||||||||||| || || |||| ||||| |||||||| ||| Sbjct 39218 CTAGAATCAGTGTTCAAGGACTGGTGGAAAGGCTCATTGCGCGGACAAACCGGCATTTTC 39277 Query 534 CCCCTCAACTATGTCGAGAAGCTGCAGGATCCTACCAAGGAGGAGCTCGAGAGAGAAGCT 593 || ||||| ||||||||||||||||||||||| || | || ||||| || | || ||| Sbjct 39278 CCGCTCAATTATGTCGAGAAGCTGCAGGATCCAACGACTGAAGAGCTGGAACGTGAGGCT 39337 Query 594 CAGATGGAGGCGGAAGTCTTTGCGGAGATCAAGAACGTGGAGAAGCTGCTAGCTCTGCTG 653 || ||||| || || || ||||| |||| ||||||||||||||| |||| ||||| Sbjct 39338 CACATGGAAGCCGATGTGTTTGCTCAGATTGGCAACGTGGAGAAGCTGTTAGCGTTGCTG 39397 Query 654 AGCACTAGT----TCG--AGTGCCGACGCTAGGGACAATGAGGAGATCACTTCGCTGTAC 707 ||||| | | || || | ||| | |||||||||||||||||||| ||| ||| Sbjct 39398 AGCACAAATGATACCGGCAGAGGCGATGTGAGGGACAATGAGGAGATCACAGAGCTTTAC 39457 Query 708 CACAAGACAGTGTCGATACGGCCGAAGTTGATCGAGCTCATTGGCAAGTATTCGCAAAAG 767 ||| || || |||| ||||||||||||||||| | |||||||| || ||||| ||| Sbjct 39458 CACTCAACCTTGGCGATTCGGCCGAAGTTGATCGAATTGATTGGCAAATACTCGCAGAAG 39517 Query 768 AAGGGTAAGT--GGAATCTTTTACGCGAATTTGTGTGTTGGC----CACTGATCGTGTTC 821 || ||| ||| | || | | ||| | | | | || | ||| | | || Sbjct 39518 AAAGGTTAGTTAGCAAGC-TCTAC---ATCTCCTCTAGTGACGCAAAACT-AACATG-AA 39571 Query 822 CAGATGATTTCACGCAGCTCAACGAGAAGTTCATCAAGGCACGCCGCGACTACGAAACCC 881 |||| || ||||| ||||| ||||| ||||||||||| ||||| || || || |||| | Sbjct 39572 CAGACGACTTCACCCAGCTAAACGAAAAGTTCATCAAAGCACGTCGAGATTATGAAATGC 39631 Query 882 TCCTTGAAGCCTCGATGTCGCAACCAGCGCAGCC 915 | || ||| |||| |||||||| || | ||||| Sbjct 39632 TTCTCGAATCCTCCATGTCGCATCCTCCACAGCC 39665 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 15945306999600