Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Venturia_20inaequalis_20[genbank_20GCA_5F002148305.1_202016-10-31] 1,413 sequences; 60,939,407 total letters Query= NC_013699.1 Length=5018 Score E Sequences producing significant alignments: (Bits) Value seq637 383 5e-103 >seq637 Length=563959 Score = 383 bits (424), Expect = 5e-103 Identities = 653/934 (70%), Gaps = 37/934 (4%) Strand=Plus/Plus Query 9 AAGGCAAAGATCCTCGAGCGTATGGGTGAATGGACGGAGATGTTCGCCAGTAACCCTGAT 68 ||| ||||||| || ||||| |||| |||||||| ||||||||| ||| | ||||| Sbjct 530269 AAGACAAAGATACTGGAGCGCATGGAAGAATGGACTGAGATGTTCTCCAAAGATCCTGAC 530328 Query 69 CTTGGCATCATGGAGCAGGCCTATATGAGGCTTAAGACACAAAGTGCGTGTGATCAACTC 128 | ||||| ||||| ||||| || |||||| | |||||||||||| | || || | Sbjct 530329 TTGGGCATAATGGAACAGGCATACATGAGGTTGAAGACACAAAGTAGGAATGC-CAGTAC 530387 Query 129 TGGTTCGTTGGGAGCACTGACCAACGTGTTGTAGACCCTAACCTGCGACCTCCGTCGAAA 188 |||| || | | | ||| | | ||| || ||||| | ||||| |||||| Sbjct 530388 TGGTAAAC---GATCGATTCCTAACAGCTCGCAGATCCGAACCTCCACCCTCCCTCGAAA 530444 Query 189 CCTCAGAAGACCCAGATCACGGACTCGGACCGCCAGAAGGAAGAGGAGGAGCTACAGATG 248 || || ||||| ||| | | || ||| ||| |||||| |||| ||||| ||| Sbjct 530445 CCGCAAAAGACACAGCTTTCAGATCAAGACAAACAGCGAGAAGAGCAGGAACTACAAATG 530504 Query 249 GCGCTGGCACTCTCCGTCAAGGAAAGCGGGACCGAGCCATCC---GCCGCCAGGTCCAAC 305 || || || || ||| | ||||| | | ||||| || | || |||| || ||| Sbjct 530505 GCACTCGCCCTGTCCATGAAGGAGAACAAGACCGCAACACCACAGGCAGCCACATCGAAC 530564 Query 306 CAGCCGCAA------GCAAAAGCCCCA----CAACAATC-CGCC-CCGGAACAAGAGCAG 353 || || ||| ||| |||| || | || || ||| || |||| | ||| Sbjct 530565 CAACCTCAATCATCAGCACAAGCTGCAGCTGCGCCAGTCTCGCAGCCTCCACAACAACAG 530624 Query 354 CATCAAGCTATTGCATCTGGAACCACAGCAGCTACCGTCTCCCGCGTTCGCGCCCTTTAC 413 | | | | | ||||| ||||| ||||| || || | || |||||| | | | Sbjct 530625 ACCCCACCCGCAGTACAAGGAACGACAGCTGCTACAGTATCAAGAGTACGCGCCTTGTTC 530684 Query 414 GACTTCACGCCCTCGGAACCCGGCGAGTTGGCTTTCCGCAAAGGCGACATTATTGCGGTT 473 || || || ||||| ||| | ||||| || | ||||| || ||||| || || || || Sbjct 530685 GATTTTACACCCTCAGAATCTGGCGAACTGTCATTCCGAAAGGGCGATATAATAGCAGTA 530744 Query 474 CTCGAGTCTGTGTACAAGGACTGGTGGAAGGGTTCTCTGCGTGGACAGACCGGCATCTTC 533 || || || |||| ||||||||||||||| || || |||| ||||| |||||||| ||| Sbjct 530745 CTAGAATCAGTGTTCAAGGACTGGTGGAAAGGCTCATTGCGCGGACAAACCGGCATTTTC 530804 Query 534 CCCCTCAACTATGTCGAGAAGCTGCAGGATCCTACCAAGGAGGAGCTCGAGAGAGAAGCT 593 || ||||| ||||||||||||||||||||||| || | || ||||| || | || ||| Sbjct 530805 CCGCTCAATTATGTCGAGAAGCTGCAGGATCCAACGACTGAAGAGCTGGAACGTGAGGCT 530864 Query 594 CAGATGGAGGCGGAAGTCTTTGCGGAGATCAAGAACGTGGAGAAGCTGCTAGCTCTGCTG 653 || ||||| || || || ||||| |||| ||||||||||||||| |||| ||||| Sbjct 530865 CACATGGAAGCCGATGTGTTTGCTCAGATTGGCAACGTGGAGAAGCTGTTAGCGTTGCTG 530924 Query 654 AGCACTAGT----TCG--AGTGCCGACGCTAGGGACAATGAGGAGATCACTTCGCTGTAC 707 ||||| | | || || | ||| | |||||||||||||||||||| ||| ||| Sbjct 530925 AGCACAAATGATACCGGCAGAGGCGATGTGAGGGACAATGAGGAGATCACAGAGCTTTAC 530984 Query 708 CACAAGACAGTGTCGATACGGCCGAAGTTGATCGAGCTCATTGGCAAGTATTCGCAAAAG 767 ||| || || |||| ||||||||||||||||| | |||||||| || ||||| ||| Sbjct 530985 CACTCAACCTTGGCGATTCGGCCGAAGTTGATCGAATTGATTGGCAAATACTCGCAGAAG 531044 Query 768 AAGGGTAAGT--GGAATCTTTTACGCGAATTTGTGTGTTGGC----CACTGATCGTGTTC 821 || ||| ||| | || | | ||| | | | | || | ||| | | || Sbjct 531045 AAAGGTTAGTTAGCAAGC-TCTAC---ATCTCCTCTAGTGACGCAAAACT-AACATG-AA 531098 Query 822 CAGATGATTTCACGCAGCTCAACGAGAAGTTCATCAAGGCACGCCGCGACTACGAAACCC 881 |||| || ||||| ||||| ||||| ||||||||||| ||||| || || || |||| | Sbjct 531099 CAGACGACTTCACCCAGCTAAACGAAAAGTTCATCAAAGCACGTCGAGATTATGAAATGC 531158 Query 882 TCCTTGAAGCCTCGATGTCGCAACCAGCGCAGCC 915 | || ||| |||| |||||||| || | ||||| Sbjct 531159 TTCTCGAATCCTCCATGTCGCATCCTCCACAGCC 531192 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 15945353565735