Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Verruconis_20gallopava_20[genbank_20GCA_5F000836295.1_202015-02-23]
367 sequences; 31,780,469 total letters
Query= NC_013699.1
Length=5018
Score E
Sequences producing significant alignments: (Bits) Value
seq13 293 7e-76
>seq13
Length=734237
Score = 293 bits (324), Expect = 7e-76
Identities = 633/944 (67%), Gaps = 57/944 (6%)
Strand=Plus/Minus
Query 2 GCAGATCAAGGCAAAGATCCTCGAGCGTATGGGTGAATGGACGGAGATGTTCGCCAGTAA 61
|||| ||||||| ||||| || || | |||| || |||||||| |||||| | |
Sbjct 581237 GCAGGTCAAGGCGAAGATTCTTGAAAGGATGGCAGAGTGGACGGAAATGTTCAAACATGA 581178
Query 62 CCCTGATCTTGGCATCATGGAGCAGGCCTATATGAGGCTTAAGACACAAAGTGCGTGTGA 121
|| ||| | || |||||||||||||| || |||||||| ||||| ||||||| || |||
Sbjct 581177 GCCAGATTTGGGAATCATGGAGCAGGCTTACATGAGGCTGAAGACTCAAAGTGTGTTTGA 581118
Query 122 -----------------TCAACTCTG------GTTCGTTGGGA-GCAC-----TGACCAA 152
|| || || | ||| | || | || | ||||
Sbjct 581117 CTGTTCCCCCGTCCCCTTCCTCTTTGAGCCGCGAACGTGGCGATGGACGAGGCTAACCAG 581058
Query 153 CGTGTTGTAGACCCTAACCTGCGACCTCCGTCGAAACCTCAGAAGACCCAGATCACGGAC 212
| |||||| |||||||| | || || || ||||| |||||||| ||| | ||||
Sbjct 581057 GGAACTGTAGATCCTAACCTACACCCACCATCAAAACCGCAGAAGACTCAGCTGTCGGAG 580998
Query 213 TCGGACCGCCAGAAG-GAAGAGGAGGAGCTACAGATGGCGCTGGCACTCTCCGTCAAGGA 271
||||| | ||| | ||||| |||||| | ||||||||||| ||||||||| | |||||
Sbjct 580997 GCGGACAGA-AGACGAGAAGAAGAGGAGTTGCAGATGGCGCTTGCACTCTCCATGAAGGA 580939
Query 272 AAGCGGGACCGAGCCATCCGCCGCCAGGTCCAACCAGCCGCAAGCAAAAGCCCCACAACA 331
||| | ||| || | | |||| || | | |||||| | | | | |||
Sbjct 580938 CAGCAAGGCCG---CAGCAACTTCCAGTGCCTCTCCGGCGCAAGGCATCGGCTCGCAAAC 580882
Query 332 ATCCGCCCCGGAACA-AGAGCAGCATCAAGCTATTGCATCTGGAACCACAGCAGCTACCG 390
| | || |||| | | ||| ||| || || || || || || || |
Sbjct 580881 ACCTGCTGAAGAACCCACTCCTGCA-CAA-------CAA--GGCACGACGGCTGCCACAG 580832
Query 391 TCTCCCGCGTTCGCGCCCTTTACGACTTCACGCCCTCGGAACCCGGCGAGTTGGCTTTCC 450
| || || || || || || || |||||||| || || || || || ||| | || || |
Sbjct 580831 TTTCACGGGTCCGTGCGCTCTATGACTTCACCCCGTCAGAGCCAGGAGAGCTAGCCTTTC 580772
Query 451 GCAAAGGCGACATTATTGCGGTTCTCGAGTCTGTGTACAAGGACTGGTGGAAGGGTTCTC 510
|||| ||||| || || || || | ||||| |||||||||||||||||||||||||| |
Sbjct 580771 GCAAGGGCGATATCATCGCCGTCATAGAGTCCGTGTACAAGGACTGGTGGAAGGGTTCCC 580712
Query 511 TGCGTGGACAGACCGGCATCTTCCCCCTCAACTATGTCGAGAAGCTGCAGGATCCTACCA 570
| || || || || ||||| || || || || |||||||| || ||||| || |
Sbjct 580711 TCAAAGGCGCAACAGGAATATTCCCTCTAAATTACGTGGAGAAGCTACAAGATCCGACGA 580652
Query 571 AGGAGGAGCTCGAGAGAGAAGCTCAGATGGAGGCGGAAGTCTTTGCGGAGATCAAGAACG 630
|| ||||| || |||||||| ||||||||| || || || | ||| || |
Sbjct 580651 GAGAAGAGCTAGAAAGAGAAGCGCAGATGGAGAGCGAGGTGTTCAACCAAATCGGCAATG 580592
Query 631 TGGAGAAGCTGCTAGCTCTGCTGAGCACTAGTTCGAGTGCCGACGCTAGGGACAATGAGG 690
||||||||||||| || ||||||||| || | || | ||| | | ||||||||||
Sbjct 580591 TGGAGAAGCTGCTTGCGCTGCTGAGCGTTAATGACAGGGGCGATGTGCGCGACAATGAGG 580532
Query 691 AGATCACTTCGCTGTACCACAAGACAGTGTCGATACGGCCGAAGTTGATCGAGCTCATTG 750
|| | || | || |||||||| || ||||| |||||| | || || || ||||
Sbjct 580531 AGGTGACGGAATTATATCACAAGACCCTGAGTATACGACCGAAGCTCATTGAACTGATTG 580472
Query 751 GCAAGTATTCGCAAAAGAAGGGTAAGTG--------GAATCTTTTACGCGAATTTGTGTG 802
| ||||||||||||||||| ||| | | ||||| | ||| | ||
Sbjct 580471 GAAAGTATTCGCAAAAGAAAGGTTTGAGCTATTCCCCAATCTAGTCCGCACA----TGGA 580416
Query 803 TTGGCCACTGATCGTGTTCCAGATGATTTCACGCAGCTCAACGAGAAGTTCATCAAGGCA 862
| || || | || || ||| || | || || ||||||||| |||||||| ||
Sbjct 580415 ATCGCTGCTAACCGCAGTCTAGACGACATGACACAACTCAACGAGCGCTTCATCAAAGCT 580356
Query 863 CGCCGCGACTACGAAACCCTCCTTGAAGCCTCGATGTCGCAACC 906
|| |||||||||||||| ||||| || || || ||||| || ||
Sbjct 580355 CGGCGCGACTACGAAACTCTCCTCGAGGCATCCATGTCACATCC 580312
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 15945535993365
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |