Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Xeromyces_20bisporus_20[genbank_20GCA_5F900006255.1_202015-01-05] 572 sequences; 22,032,815 total letters Query= NC_013699.1 Length=5018 Score E Sequences producing significant alignments: (Bits) Value seq396 253 7e-64 >seq396 Length=587045 Score = 253 bits (280), Expect = 7e-64 Identities = 404/576 (70%), Gaps = 18/576 (3%) Strand=Plus/Minus Query 356 TCAAGCTATTGCATCTGGAACCACAGCAGCTACCGTCTCCCGCGTTCGCGCCCTTTACGA 415 ||| || || | || || ||| | || |||||||| || ||||| | || | | ||| Sbjct 249115 TCATGCCGTTCCTTCGGGTACCTCCGCTGCTACCGTTTCACGCGTCAGGGCTTTGTTCGA 249056 Query 416 CTTCACGCCCTCGGAACCCGGCGAGTTGGCTTTCCGCAAAGGCGACATTATTGCGGTTCT 475 |||| ||||| ||||| ||||| | || |||||||| || | ||||||||||| Sbjct 249055 CTTCCAACCCTCTGAACCGGGCGAACTCCAGTTTCGCAAAGGAGATGTCATTGCGGTTCT 248996 Query 476 CGAGTCTGTGTACAAGGACTGGTGGAAGGGTTCTCTGCGTGGACAGACCGGCATCTTCCC 535 |||||| ||||| || || |||||||||||||| ||| | ||||| ||||| || ||||| Sbjct 248995 CGAGTCAGTGTATAAAGATTGGTGGAAGGGTTCGCTGAGAGGACAAACCGGGATTTTCCC 248936 Query 536 CCTCAACTATGTCGAGAAGCTGCAGGATCCTACCAAGGAGGAGCTCGAGAGAGAAGCTCA 595 | ||||| || || ||||| | || || || ||| ||| | || | || || || Sbjct 248935 GTTAAACTACGTGGAAAAGCTCCCCGACCCGACGGTGGAAGAGTTGCAGCGGGAGGCCCA 248876 Query 596 GATGGAGGCGGAAGTCTTTGCGGAGATCAAGAACGTGGAGAAGCTGCTAGCTCTGCTGAG 655 | |||||| || || |||| |||| ||||| || |||||||| || | || ||||| Sbjct 248875 AACGGAGGCAGACGTGTTTGGCCAGATAAAGAATGTCGAGAAGCTACTGACGCTTCTGAG 248816 Query 656 CAC---TAGTTCGAGTGCCGACGCTAGGGACAATGAGGAGATCACTTCGCTGTACCACAA 712 ||| ||||| | | | | ||| ||||||||| | || |||||||| Sbjct 248815 CACACGCAGTTCTGATCTCAATGTGCAGGAGAATGAGGAGGTTACGCAACTGTACCATTC 248756 Query 713 GACAGTGTCGATACGGCCGAAGTTGATCGAGCTCATTGGCAAGTATTCGCAAAAGAAGGG 772 ||| || | || |||| || ||||| ||||||||||| ||||||||||||||||| || Sbjct 248755 GACTTTGGCAATCAGGCCCAAATTGATTGAGCTCATTGGGAAGTATTCGCAAAAGAAAGG 248696 Query 773 TAAGT---GGAATCTTTTACGCGAATTTGTGTGTTGGCCAC---TGATCGTG------TT 820 | || || |||| | | ||| || ||| |||| ||| || Sbjct 248695 TGCGTCAGTGAGGACTTTA-GTGTATT--TGACTTGACCACTTGTGAAGCTGACAACCGG 248639 Query 821 CCAGATGATTTCACGCAGCTCAACGAGAAGTTCATCAAGGCACGCCGCGACTACGAAACC 880 ||||| || |||||||| ||||| ||||| |||||||||||||| | || ||||| | Sbjct 248638 CCAGACGAATTCACGCAACTCAATGAGAAATTCATCAAGGCACGGAGAGATTACGAGTCG 248579 Query 881 CTCCTTGAAGCCTCGATGTCGCAACCAGCGCAGCCC 916 || | ||||| || ||||| || || || |||||| Sbjct 248578 CTGTTGGAAGCGTCCATGTCACATCCCGCCCAGCCC 248543 Score = 87.8 bits (96), Expect = 6e-14 Identities = 89/116 (77%), Gaps = 0/116 (0%) Strand=Plus/Minus Query 2 GCAGATCAAGGCAAAGATCCTCGAGCGTATGGGTGAATGGACGGAGATGTTCGCCAGTAA 61 |||| ||||| ||| ||||||||||||||| ||||||||||||||||| | || Sbjct 249487 GCAGGTCAAGTCAACCATCCTCGAGCGTATGCAGGAATGGACGGAGATGTTTTCGGCGAA 249428 Query 62 CCCTGATCTTGGCATCATGGAGCAGGCCTATATGAGGCTTAAGACACAAAGTGCGT 117 ||| ||| |||| || ||||||||||| || | | | | || ||||| |||| || Sbjct 249427 CCCAGATTTTGGGATTATGGAGCAGGCGTACTTTAAGTTGAAAACACAGAGTGAGT 249372 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 15945500240340