Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zymoseptoria_20ardabiliae_20[genbank_20GCA_5F000983525.1_202015-04- 30] 3,673 sequences; 34,411,184 total letters Query= NC_013699.1 Length=5018 Score E Sequences producing significant alignments: (Bits) Value seq996 275 2e-70 >seq996 Length=334376 Score = 275 bits (304), Expect = 2e-70 Identities = 396/550 (72%), Gaps = 20/550 (4%) Strand=Plus/Minus Query 372 GGAACCACAGCAGCTACCGTCTCCCGCGTTCGCGCCCTTTACGACTTCACGCCCTCGGAA 431 ||||| ||||| || || ||| | | || ||||| || |||||||| || || | || Sbjct 171485 GGAACGACAGCTGCGACTGTCAGCAGGGTGCGCGCTCTGTACGACTTTACACCAACCGAG 171426 Query 432 CCCGGCGAGTTGGCTTTCCGCAAAGGCGACATTATTGCGGTTCTCGAGTCTGTGTACAAG 491 | |||||| ||||||||||||| |||||||||||| || | || || || |||||| Sbjct 171425 GCGGGCGAGCTGGCTTTCCGCAAGAACGACATTATTGCTGTCTTGGAATCGGTCTACAAG 171366 Query 492 GACTGGTGGAAGGGTTCTCTGCGTGGACAGACCGGCATCTTCCCCCTCAACTATGTCGAG 551 ||||||||||| ||| ||||||| ||||| || |||||||| ||||| || ||||| Sbjct 171365 GACTGGTGGAAAGGTAGCTTGCGTGGTCAGACTGGTATCTTCCCGCTCAATTACGTCGAA 171306 Query 552 AAGCTGCAGGATCCTACCAAGGAGGAGCTCGAGAGAGAAGCTCAGATGGAGGCGGAAGTC 611 |||||||||||||| || || || ||| | ||| | || || ||||||||| | || || Sbjct 171305 AAGCTGCAGGATCCCACAAAAGACGAGATGGAGCGCGATGCACAGATGGAGTCCGAGGTG 171246 Query 612 TTTGCGGAGATCAAGAACGTGGAGAAGCTGCTAGCTCTGCTGAGC--------ACTAGTT 663 |||| ||| ||||||| ||||||||||| || || |||| ||| | | Sbjct 171245 TTTGGCGAGGTCAAGAATGTGGAGAAGCTACTGGCATTGCTCAGCGTGGGCGGTGAGGCT 171186 Query 664 CGAGT--GCCGACGCTA--GGGACAATGAGGAGATCACTTCGCTGTACCACAAGACAGTG 719 | || | ||| || | | || | || ||||||| |||||||| || || Sbjct 171185 GGCGTACGGCGAGGCGAGCGCGAGGAGGAAGAGATCAGCGAACTGTACCAGCGCACTCTG 171126 Query 720 TCGATACGGCCGAAGTTGATCGAGCTCATTGGCAAGTATTCGCAAAAGAAGGGTAAGTGG 779 || ||||| ||| | || ||||| |||| || |||||||||||||||||| ||| Sbjct 171125 AGCATCCGGCCAAAGCTCATTGAGCTGATTGCCAGATATTCGCAAAAGAAGGGTGAGTCC 171066 Query 780 A-ATCTTTTACG-CGAAT-TTGTGTGTTGGCCACTGATCGTGTTCCAGATGATTTCACGC 836 | ||| | ||||| ||| ||| || | || || ||| ||||||| ||||| | Sbjct 171065 AGATCGGCGCTGTCGAATATTGCCTGT--GCTAATGTTC-TGT--CAGATGACTTCACAC 171011 Query 837 AGCTCAACGAGAAGTTCATCAAGGCACGCCGCGACTACGAAACCCTCCTTGAAGCCTCGA 896 |||| ||||| |||||||||||||| || || || |||||| | || || ||| | || | Sbjct 171010 AGCTGAACGAAAAGTTCATCAAGGCGCGGCGAGATTACGAAGCACTGCTGGAATCATCCA 170951 Query 897 TGTCGCAACC 906 |||| || || Sbjct 170950 TGTCTCAGCC 170941 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 15944959410435