Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Zymoseptoria_20ardabiliae_20[genbank_20GCA_5F000983525.1_202015-04-
30] 3,673 sequences; 34,411,184 total letters
Query= NC_013699.1
Length=5018
Score E
Sequences producing significant alignments: (Bits) Value
seq996 275 2e-70
>seq996
Length=334376
Score = 275 bits (304), Expect = 2e-70
Identities = 396/550 (72%), Gaps = 20/550 (4%)
Strand=Plus/Minus
Query 372 GGAACCACAGCAGCTACCGTCTCCCGCGTTCGCGCCCTTTACGACTTCACGCCCTCGGAA 431
||||| ||||| || || ||| | | || ||||| || |||||||| || || | ||
Sbjct 171485 GGAACGACAGCTGCGACTGTCAGCAGGGTGCGCGCTCTGTACGACTTTACACCAACCGAG 171426
Query 432 CCCGGCGAGTTGGCTTTCCGCAAAGGCGACATTATTGCGGTTCTCGAGTCTGTGTACAAG 491
| |||||| ||||||||||||| |||||||||||| || | || || || ||||||
Sbjct 171425 GCGGGCGAGCTGGCTTTCCGCAAGAACGACATTATTGCTGTCTTGGAATCGGTCTACAAG 171366
Query 492 GACTGGTGGAAGGGTTCTCTGCGTGGACAGACCGGCATCTTCCCCCTCAACTATGTCGAG 551
||||||||||| ||| ||||||| ||||| || |||||||| ||||| || |||||
Sbjct 171365 GACTGGTGGAAAGGTAGCTTGCGTGGTCAGACTGGTATCTTCCCGCTCAATTACGTCGAA 171306
Query 552 AAGCTGCAGGATCCTACCAAGGAGGAGCTCGAGAGAGAAGCTCAGATGGAGGCGGAAGTC 611
|||||||||||||| || || || ||| | ||| | || || ||||||||| | || ||
Sbjct 171305 AAGCTGCAGGATCCCACAAAAGACGAGATGGAGCGCGATGCACAGATGGAGTCCGAGGTG 171246
Query 612 TTTGCGGAGATCAAGAACGTGGAGAAGCTGCTAGCTCTGCTGAGC--------ACTAGTT 663
|||| ||| ||||||| ||||||||||| || || |||| ||| | |
Sbjct 171245 TTTGGCGAGGTCAAGAATGTGGAGAAGCTACTGGCATTGCTCAGCGTGGGCGGTGAGGCT 171186
Query 664 CGAGT--GCCGACGCTA--GGGACAATGAGGAGATCACTTCGCTGTACCACAAGACAGTG 719
| || | ||| || | | || | || ||||||| |||||||| || ||
Sbjct 171185 GGCGTACGGCGAGGCGAGCGCGAGGAGGAAGAGATCAGCGAACTGTACCAGCGCACTCTG 171126
Query 720 TCGATACGGCCGAAGTTGATCGAGCTCATTGGCAAGTATTCGCAAAAGAAGGGTAAGTGG 779
|| ||||| ||| | || ||||| |||| || |||||||||||||||||| |||
Sbjct 171125 AGCATCCGGCCAAAGCTCATTGAGCTGATTGCCAGATATTCGCAAAAGAAGGGTGAGTCC 171066
Query 780 A-ATCTTTTACG-CGAAT-TTGTGTGTTGGCCACTGATCGTGTTCCAGATGATTTCACGC 836
| ||| | ||||| ||| ||| || | || || ||| ||||||| ||||| |
Sbjct 171065 AGATCGGCGCTGTCGAATATTGCCTGT--GCTAATGTTC-TGT--CAGATGACTTCACAC 171011
Query 837 AGCTCAACGAGAAGTTCATCAAGGCACGCCGCGACTACGAAACCCTCCTTGAAGCCTCGA 896
|||| ||||| |||||||||||||| || || || |||||| | || || ||| | || |
Sbjct 171010 AGCTGAACGAAAAGTTCATCAAGGCGCGGCGAGATTACGAAGCACTGCTGGAATCATCCA 170951
Query 897 TGTCGCAACC 906
|||| || ||
Sbjct 170950 TGTCTCAGCC 170941
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 15944959410435
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |