Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zymoseptoria_20brevis_20[genbank_20GCA_5F000966595.1_202015-03-31] 6,070 sequences; 31,914,300 total letters Query= NC_013699.1 Length=5018 Score E Sequences producing significant alignments: (Bits) Value seq51 241 4e-60 >seq51 Length=38942 Score = 241 bits (266), Expect = 4e-60 Identities = 390/557 (70%), Gaps = 33/557 (6%) Strand=Plus/Plus Query 372 GGAACCACAGCAGCTACCGTCTCCCGCGTTCGCGCCCTTTACGACTTCACGCCCTCGGAA 431 || || ||||| || |||||| | | || || || || ||||||||||| || | || Sbjct 11554 GGGACGACAGCTGCGACCGTCAGCAGGGTGCGTGCTCTGTACGACTTCACACCAACCGAG 11613 Query 432 CCCGGCGAGTTGGCTTTCCGCAAAGGCGACATTATTGCGGTTCTCGAGTCTGTGTACAAG 491 | |||||| ||||||||||||| |||||| ||||| || | || ||||| |||||| Sbjct 11614 GCGGGCGAGCTGGCTTTCCGCAAGAACGACATAATTGCTGTATTGGAATCTGTTTACAAG 11673 Query 492 GACTGGTGGAAGGGTTCTCTGCGTGGACAGACCGGCATCTTCCCCCTCAACTATGTCGAG 551 ||||||||||| ||| |||| |||||||| ||||| ||||| |||||||| || || Sbjct 11674 GACTGGTGGAAAGGTAGCTTGCGCGGACAGACTGGCATTTTCCCGCTCAACTACGTTGAA 11733 Query 552 AAGCTGCAGGATCCTACCAAGGAGGAGCTCGAGAGAGAAGCTCAGATGGAGGCGGAAGTC 611 ||||| ||||| || || || || ||| | ||| | || || ||||||||| | || || Sbjct 11734 AAGCTACAGGACCCCACGAAAGACGAGATGGAGCGCGATGCGCAGATGGAGTCTGAGGTA 11793 Query 612 TTTGCGGAGATCAAGAACGTGGAGAAGCTGCTAGCTCTGCTGAGC-------ACTAGTTC 664 || | ||| ||||||| |||||||||||| | || |||| ||| | || | Sbjct 11794 TTCGGCGAGGTCAAGAATGTGGAGAAGCTGTTGGCGTTGCTCAGCGTCGGCGGCGAGGCC 11853 Query 665 --------GAGTGCCGA-CGCTAGGGACAATGAGGAGATCACTTCGCTGTACCACAAGAC 715 | ||| ||| ||| ||| | || ||||||| |||| || || Sbjct 11854 GGCGGACGGCGTGGCGAGCGCGAGG----AGGAAGAGATCAGCGAATTGTATCAGCGCAC 11909 Query 716 AGTGTCGATACGGCCGAAGTTGATCGAGCTCATTGGCAAGTATTCGCAAAAGAAGGGTAA 775 || || ||||| ||| | || ||||| |||| || ||||||||||||||||||| | Sbjct 11910 TCTGAGCATCCGGCCAAAGCTCATTGAGCTGATTGCCAGGTATTCGCAAAAGAAGGGTGA 11969 Query 776 GTGGAATCTTTTACGCGAATTTGTGT-GTTGGCCACTG-----ATCGTGTTCCAGATGAT 829 || || || | | ||| ||| | | || || | | ||| |||| || Sbjct 11970 GTTCAA-CTAT----GGCATTCATGTAGATTGCTCGTGCTAACAACCTGT--CAGACGAC 12022 Query 830 TTCACGCAGCTCAACGAGAAGTTCATCAAGGCACGCCGCGACTACGAAACCCTCCTTGAA 889 ||||| ||||| ||||| |||||||||||||| || || || |||||| | || || ||| Sbjct 12023 TTCACACAGCTGAACGAAAAGTTCATCAAGGCGCGGCGAGATTACGAAGCACTGCTGGAA 12082 Query 890 GCCTCGATGTCGCAACC 906 | || ||||| || || Sbjct 12083 TCGTCCATGTCTCAGCC 12099 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 15944541361650