Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Geotrichum_20candidum_20[genbank_20GCA_5F000743665.1_202014-08-26]
560 sequences; 41,384,521 total letters
Query= NC_013699.1
Length=5018
Score E
Sequences producing significant alignments: (Bits) Value
seq19 165 3e-37
>seq19
Length=878005
Score = 165 bits (182), Expect = 3e-37
Identities = 244/345 (71%), Gaps = 3/345 (1%)
Strand=Plus/Minus
Query 356 TCAAGCTATTGCATCTGGAACCACAGCAGCTACCGTCTCCCGCGTTCGCGCCCTTTACGA 415
|||||| | || | || || || || ||||| ||||| || ||| | || | |||||
Sbjct 257846 TCAAGCCGTAGCTCCCGGCACAACGGCTGCTACAGTCTCTCGGGTTAGAGCGTTGTACGA 257787
Query 416 CTTCACGCCCTCGGAACCCGGCGAGTTGGCTTTCCGCAAAGGCGACATTATTGCGGTTCT 475
||| | || | || || | || | || | ||||| || ||||| || ||| |
Sbjct 257786 TTTCCAGGCCACCGATCCAGATGAACTACAGTTTAGGAAAGGTGATATTATAGCCGTTAT 257727
Query 476 CGAGTCTGTGTACAAGGACTGGTGGAAGGGTTCTCTGCGTGGACAGACCGGCATCTTCCC 535
|||||| || ||||| || ||||||||||| | | |||||| |||| ||||| || ||
Sbjct 257726 CGAGTCGGTTTACAAAGATTGGTGGAAGGGCCTTTTACGTGGAAAGACGGGCATTTTTCC 257667
Query 536 CCTCAACTATGTCGAGAAGCTGCAGGATCCTACCAAGGAGGAGCTCGAGAGAGAAGCTCA 595
| ||||||||||||||||| | ||||| || |||||||| | | ||||| ||
Sbjct 257666 TTTGAACTATGTCGAGAAGCTCCCAGATCCCACACCTGAGGAGCTACAACGGGAAGCACA 257607
Query 596 GATGGAGGCGGAAGTCTTTGCGGAGATCAAGAACGTGGAGAAGCTGCTAGCTCTGCTGAG 655
|||||| || |||||||||| ||||| |||||||| |||||||| || || | || ||
Sbjct 257606 GATGGAAGCCGAAGTCTTTGGCGAGATTAAGAACGTTGAGAAGCTCCTTACTTTACTTAG 257547
Query 656 CA---CTAGTTCGAGTGCCGACGCTAGGGACAATGAGGAGATCAC 697
| || ||| | | | ||| |||||||||||||| ||
Sbjct 257546 TACATCTTCTTCAGATTTGAATGTTAGAGACAATGAGGAGATTAC 257502
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 15945502333200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |