Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Geotrichum_20candidum_20[genbank_20GCA_5F000743665.1_202014-08-26] 560 sequences; 41,384,521 total letters Query= NC_013699.1 Length=5018 Score E Sequences producing significant alignments: (Bits) Value seq19 165 3e-37 >seq19 Length=878005 Score = 165 bits (182), Expect = 3e-37 Identities = 244/345 (71%), Gaps = 3/345 (1%) Strand=Plus/Minus Query 356 TCAAGCTATTGCATCTGGAACCACAGCAGCTACCGTCTCCCGCGTTCGCGCCCTTTACGA 415 |||||| | || | || || || || ||||| ||||| || ||| | || | ||||| Sbjct 257846 TCAAGCCGTAGCTCCCGGCACAACGGCTGCTACAGTCTCTCGGGTTAGAGCGTTGTACGA 257787 Query 416 CTTCACGCCCTCGGAACCCGGCGAGTTGGCTTTCCGCAAAGGCGACATTATTGCGGTTCT 475 ||| | || | || || | || | || | ||||| || ||||| || ||| | Sbjct 257786 TTTCCAGGCCACCGATCCAGATGAACTACAGTTTAGGAAAGGTGATATTATAGCCGTTAT 257727 Query 476 CGAGTCTGTGTACAAGGACTGGTGGAAGGGTTCTCTGCGTGGACAGACCGGCATCTTCCC 535 |||||| || ||||| || ||||||||||| | | |||||| |||| ||||| || || Sbjct 257726 CGAGTCGGTTTACAAAGATTGGTGGAAGGGCCTTTTACGTGGAAAGACGGGCATTTTTCC 257667 Query 536 CCTCAACTATGTCGAGAAGCTGCAGGATCCTACCAAGGAGGAGCTCGAGAGAGAAGCTCA 595 | ||||||||||||||||| | ||||| || |||||||| | | ||||| || Sbjct 257666 TTTGAACTATGTCGAGAAGCTCCCAGATCCCACACCTGAGGAGCTACAACGGGAAGCACA 257607 Query 596 GATGGAGGCGGAAGTCTTTGCGGAGATCAAGAACGTGGAGAAGCTGCTAGCTCTGCTGAG 655 |||||| || |||||||||| ||||| |||||||| |||||||| || || | || || Sbjct 257606 GATGGAAGCCGAAGTCTTTGGCGAGATTAAGAACGTTGAGAAGCTCCTTACTTTACTTAG 257547 Query 656 CA---CTAGTTCGAGTGCCGACGCTAGGGACAATGAGGAGATCAC 697 | || ||| | | | ||| |||||||||||||| || Sbjct 257546 TACATCTTCTTCAGATTTGAATGTTAGAGACAATGAGGAGATTAC 257502 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 15945502333200