Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Scheffersomyces_20lignosus_20[genbank_20GCA_5F001599395.1_202016-03-
01] 19 sequences; 16,592,489 total letters
Query= NC_003745.1
Length=4579
Score E
Sequences producing significant alignments: (Bits) Value
seq1 277 5e-71
>seq1
Length=3149860
Score = 277 bits (306), Expect = 5e-71
Identities = 631/944 (67%), Gaps = 4/944 (0%)
Strand=Plus/Minus
Query 3031 AAACAGATGGGAGTGGGTTCCAGGTGGCAGTGTCCACTCTCAATACGAAGAAGACAACGA 3090
||| |||||||| |||||||| || || ||||| || ||||||||| | ||||| || ||
Sbjct 1821721 AAATAGATGGGAATGGGTTCCGGGAGGAAGTGTTCATTCTCAATACAATGAAGATAATGA 1821662
Query 3091 TTATATCTATCCTGGTCAGTATACTAGGAACAAGTTCATAACTGTTAACAAAATGCCCAA 3150
|| ||| | ||| | |||||| ||| ||||| | ||| | || ||||| ||
Sbjct 1821661 ATACATCATTAAAGGTTTGCATACTATGAATAAGTTTGTCACTTTAAATCTCATGCCAAA 1821602
Query 3151 ACACAAAATATCTAGAATGATAGCATCACCGCCTGAGGTACGAGCTTGGACGTCGACGAA 3210
||| || |||| | | | || || |||| |||||||| || || ||
Sbjct 1821601 GGCCAAGATTGCTAGCTTTTTTGGGAGTAAACCAGAAATACGTGCTTGGACTTCAACAAA 1821542
Query 3211 GTACGAATGGGGCAAGCAACGTGCTATCTACGGGACGGATCTACGAAGTACACTGATAAC 3270
||||||||||| ||||| | || || || || || || | || ||||| | ||||
Sbjct 1821541 ATACGAATGGGGAAAGCAGAGAGCGATTTATGGAACAGACTTGCGCAGTACTGTCATAAG 1821482
Query 3271 TAACTTTGCAATGTTCAGGTGCGAGGATGTTCTCACTCACAAGTTCCCAGTAGGCGACCA 3330
|| ||||| ||||| || || || || |||| |||| ||| || ||||||| ||
Sbjct 1821481 CAATTTTGCTATGTTTAGATGTGAAGAGTCACTCAAACACATGTTTCCTATAGGCGAGCA 1821422
Query 3331 GGCAGAGGC-AGCAAAGGTGCACAAACGGGTGAACATGATGCTGGACGGTGCCTCTAGTT 3389
|||||| | |||||| || |||||||| | | |||| || ||| |||||
Sbjct 1821421 GGCAGAATCTAGCAAA-GTACACAAACGAATCAGTCAGATGTTGCTTGGTTATGATAGTT 1821363
Query 3390 TCTGCTTCGATTATGATGACTTCAATTCTCAGCATTCAATAGCTAGTATGTATACGGTTT 3449
| || || || || |||||||||||||||||||| || || | ||| | | || |
Sbjct 1821362 TTTGTTTTGACTACGATGACTTCAATTCTCAGCACTCCATTTCATCAATGAAAGCAGTCT 1821303
Query 3450 TGTGCG-CTTTCAGGGACACATTTAGTCGCAACATGTCTGATGAACAAGCAGAGGCGATG 3508
| | | |||||| ||| | |||| |||||||| | || ||| | ||||||
Sbjct 1821302 TATATGCCTTTCA-TGACGCGTTTAAAGATGACATGTCTAAAGATCAACTGGCAGCGATG 1821244
Query 3509 AACTGGGTGTGTGAGTCCGTCAGACACATGTGGGTACTAGATCCTGATACCAAGGAGTGG 3568
| ||| |||||| ||| | | |||| | || |||||| || || ||||
Sbjct 1821243 CAATGGACAATTGAGTCTGTCGAAAATATGTATGCTCTTGATCCTAATCTGAATTCGTGG 1821184
Query 3569 TACAGACTACAAGGTACATTACTGTCAGGATGGCGGTTAACCACATTTATGAACACTGTG 3628
|| || | ||||| || || || || ||| | |||||||||||||||||||| ||
Sbjct 1821183 TATCATCTTCGTGGTACTTTGCTTTCTGGTTGGAGATTAACCACATTTATGAACACAGTC 1821124
Query 3629 CTAAACTGGGCGTATATGAAATTAGCTGGCGTATTTGATCTGGATGACGTTCAAGACTCG 3688
| || |||| |||||| | | || || | ||| | | || | || || ||
Sbjct 1821123 TTGAATTGGGTTTATATGGATATTGCGGGTGCGTTTAAGGTTGAGGGGTTTTCTGATTCT 1821064
Query 3689 GTACACAACGGTGATGATGTTATGATTAGTCTCAACCGCGTGAGCACAGCAGTAAGAATA 3748
|| || || || ||||| || |||||||| || || | | ||||||| | |||
Sbjct 1821063 GTTCATAATGGAGATGACGTGATGATTAGCCTAAATACAATTAAGGCAGCAGTCACAATT 1821004
Query 3749 ATGGACGCTATGCACCGGATAAATGCGCGAGCACAGCCGGCGAAGTGTAACTTGTTTTCG 3808
||| || ||| || ||||| |||| || | |||||||| | || ||
Sbjct 1821003 ATGCACAAAATGAGTTTAATCAATGCTAGAGCCCAAGTAACAAAGTGTAATGTTTTGTCT 1820944
Query 3809 ATAAGTGAATTTCTGAGGGTAGAACACGGTATGAGCGGAGGCGATGGTCTTGGGGCTCAG 3868
|| ||||||||| | ||||| |||||||| |||| || ||||| | || |||||
Sbjct 1820943 ATTAGTGAATTTTTAAGGGTTGAACACGGAATGAAAGGTTCAGATGGATTGGGAGCTCAA 1820884
Query 3869 TACTTAAGTAGGTCTTGTGCTACTCTTGTACACAGTAGGATTGAGTCTAACGAACCACTG 3928
|| | | ||||| |||| || || || ||||| ||||| || ||||| ||| |
Sbjct 1820883 TATCTTACAAGGTCAAGTGCAACCATTACTCATAGTAGAATTGAATCAAACGAGCCAATT 1820824
Query 3929 TCAGTAGTACGAGTTATGGAAGCAGACCAGGCTAGATTGCGCGA 3972
|||||| || || | || ||||||||| | ||||| | |||||
Sbjct 1820823 TCAGTATTAAGATTGATTGAAGCAGACGAAACTAGACTTCGCGA 1820780
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 14540796978240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |