Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scheffersomyces_20lignosus_20[genbank_20GCA_5F001599395.1_202016-03- 01] 19 sequences; 16,592,489 total letters Query= NC_003745.1 Length=4579 Score E Sequences producing significant alignments: (Bits) Value seq1 277 5e-71 >seq1 Length=3149860 Score = 277 bits (306), Expect = 5e-71 Identities = 631/944 (67%), Gaps = 4/944 (0%) Strand=Plus/Minus Query 3031 AAACAGATGGGAGTGGGTTCCAGGTGGCAGTGTCCACTCTCAATACGAAGAAGACAACGA 3090 ||| |||||||| |||||||| || || ||||| || ||||||||| | ||||| || || Sbjct 1821721 AAATAGATGGGAATGGGTTCCGGGAGGAAGTGTTCATTCTCAATACAATGAAGATAATGA 1821662 Query 3091 TTATATCTATCCTGGTCAGTATACTAGGAACAAGTTCATAACTGTTAACAAAATGCCCAA 3150 || ||| | ||| | |||||| ||| ||||| | ||| | || ||||| || Sbjct 1821661 ATACATCATTAAAGGTTTGCATACTATGAATAAGTTTGTCACTTTAAATCTCATGCCAAA 1821602 Query 3151 ACACAAAATATCTAGAATGATAGCATCACCGCCTGAGGTACGAGCTTGGACGTCGACGAA 3210 ||| || |||| | | | || || |||| |||||||| || || || Sbjct 1821601 GGCCAAGATTGCTAGCTTTTTTGGGAGTAAACCAGAAATACGTGCTTGGACTTCAACAAA 1821542 Query 3211 GTACGAATGGGGCAAGCAACGTGCTATCTACGGGACGGATCTACGAAGTACACTGATAAC 3270 ||||||||||| ||||| | || || || || || || | || ||||| | |||| Sbjct 1821541 ATACGAATGGGGAAAGCAGAGAGCGATTTATGGAACAGACTTGCGCAGTACTGTCATAAG 1821482 Query 3271 TAACTTTGCAATGTTCAGGTGCGAGGATGTTCTCACTCACAAGTTCCCAGTAGGCGACCA 3330 || ||||| ||||| || || || || |||| |||| ||| || ||||||| || Sbjct 1821481 CAATTTTGCTATGTTTAGATGTGAAGAGTCACTCAAACACATGTTTCCTATAGGCGAGCA 1821422 Query 3331 GGCAGAGGC-AGCAAAGGTGCACAAACGGGTGAACATGATGCTGGACGGTGCCTCTAGTT 3389 |||||| | |||||| || |||||||| | | |||| || ||| ||||| Sbjct 1821421 GGCAGAATCTAGCAAA-GTACACAAACGAATCAGTCAGATGTTGCTTGGTTATGATAGTT 1821363 Query 3390 TCTGCTTCGATTATGATGACTTCAATTCTCAGCATTCAATAGCTAGTATGTATACGGTTT 3449 | || || || || |||||||||||||||||||| || || | ||| | | || | Sbjct 1821362 TTTGTTTTGACTACGATGACTTCAATTCTCAGCACTCCATTTCATCAATGAAAGCAGTCT 1821303 Query 3450 TGTGCG-CTTTCAGGGACACATTTAGTCGCAACATGTCTGATGAACAAGCAGAGGCGATG 3508 | | | |||||| ||| | |||| |||||||| | || ||| | |||||| Sbjct 1821302 TATATGCCTTTCA-TGACGCGTTTAAAGATGACATGTCTAAAGATCAACTGGCAGCGATG 1821244 Query 3509 AACTGGGTGTGTGAGTCCGTCAGACACATGTGGGTACTAGATCCTGATACCAAGGAGTGG 3568 | ||| |||||| ||| | | |||| | || |||||| || || |||| Sbjct 1821243 CAATGGACAATTGAGTCTGTCGAAAATATGTATGCTCTTGATCCTAATCTGAATTCGTGG 1821184 Query 3569 TACAGACTACAAGGTACATTACTGTCAGGATGGCGGTTAACCACATTTATGAACACTGTG 3628 || || | ||||| || || || || ||| | |||||||||||||||||||| || Sbjct 1821183 TATCATCTTCGTGGTACTTTGCTTTCTGGTTGGAGATTAACCACATTTATGAACACAGTC 1821124 Query 3629 CTAAACTGGGCGTATATGAAATTAGCTGGCGTATTTGATCTGGATGACGTTCAAGACTCG 3688 | || |||| |||||| | | || || | ||| | | || | || || || Sbjct 1821123 TTGAATTGGGTTTATATGGATATTGCGGGTGCGTTTAAGGTTGAGGGGTTTTCTGATTCT 1821064 Query 3689 GTACACAACGGTGATGATGTTATGATTAGTCTCAACCGCGTGAGCACAGCAGTAAGAATA 3748 || || || || ||||| || |||||||| || || | | ||||||| | ||| Sbjct 1821063 GTTCATAATGGAGATGACGTGATGATTAGCCTAAATACAATTAAGGCAGCAGTCACAATT 1821004 Query 3749 ATGGACGCTATGCACCGGATAAATGCGCGAGCACAGCCGGCGAAGTGTAACTTGTTTTCG 3808 ||| || ||| || ||||| |||| || | |||||||| | || || Sbjct 1821003 ATGCACAAAATGAGTTTAATCAATGCTAGAGCCCAAGTAACAAAGTGTAATGTTTTGTCT 1820944 Query 3809 ATAAGTGAATTTCTGAGGGTAGAACACGGTATGAGCGGAGGCGATGGTCTTGGGGCTCAG 3868 || ||||||||| | ||||| |||||||| |||| || ||||| | || ||||| Sbjct 1820943 ATTAGTGAATTTTTAAGGGTTGAACACGGAATGAAAGGTTCAGATGGATTGGGAGCTCAA 1820884 Query 3869 TACTTAAGTAGGTCTTGTGCTACTCTTGTACACAGTAGGATTGAGTCTAACGAACCACTG 3928 || | | ||||| |||| || || || ||||| ||||| || ||||| ||| | Sbjct 1820883 TATCTTACAAGGTCAAGTGCAACCATTACTCATAGTAGAATTGAATCAAACGAGCCAATT 1820824 Query 3929 TCAGTAGTACGAGTTATGGAAGCAGACCAGGCTAGATTGCGCGA 3972 |||||| || || | || ||||||||| | ||||| | ||||| Sbjct 1820823 TCAGTATTAAGATTGATTGAAGCAGACGAAACTAGACTTCGCGA 1820780 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 14540796978240