Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scheffersomyces_20lignosus_20[genbank_20GCA_5F001599395.1_202016-03- 01] 19 sequences; 16,592,489 total letters Query= NC_029096.1 Length=5003 Score E Sequences producing significant alignments: (Bits) Value seq1 107 6e-20 >seq1 Length=3149860 Score = 107 bits (118), Expect = 6e-20 Identities = 297/446 (67%), Gaps = 16/446 (4%) Strand=Plus/Minus Query 3352 TGGGTACAAGTACGCTAGGATGGA-CTTGAACAAGTATGTCAAATCGAGATGGGAGTGGG 3410 ||| || || ||| | | |||||| || ||| | |||| | || |||||||| |||| Sbjct 1821763 TGGATATAAATACCCCAAGATGGAACTAGAAGA-GTATTTGCAAAATAGATGGGAATGGG 1821705 Query 3411 TGCCATCTGGAAGTGTGCATTCGCAATA---TGAAGAGGATGAGCCTTACATTAAGAAGA 3467 | || |||||||| ||||| ||||| |||||| |||| |||||| || Sbjct 1821704 TTCCGGGAGGAAGTGTTCATTCTCAATACAATGAAGATAATGAATACATCATTAA--AGG 1821647 Query 3468 GCAACATGCATAGGACCAAGTTTGTTACTGTAAATATGTTGAGCAGAGCGCACATACGCA 3527 ||| | || || |||||||| ||| ||||| | || | || | || | Sbjct 1821646 TTTGCATAC-TATGAATAAGTTTGTCACTTTAAATCTCATGCCAAAGGCCAAGATTGCTA 1821588 Query 3528 GAATATTTGCCAGGAAGAAGGAAATTCATGCTTGGGCAAGTGTGAAGTATGAGTGGGCAA 3587 | | |||| || || ||||| | ||||||| | || || || |||| || Sbjct 1821587 GCTTTTTTGGGAGTAAACCAGAAATACGTGCTTGGACTTCAACAAAATACGAATGGGGAA 1821528 Query 3588 AGCAGCGAGCAATATATGGAGTAGACTTGACAAGCTCCATAATAACTAATTTCGCTATGT 3647 ||||| |||| || |||||| ||||||| || | | |||| ||||| ||||||| Sbjct 1821527 AGCAGAGAGCGATTTATGGAACAGACTTGCGCAGTACTGTCATAAGCAATTTTGCTATGT 1821468 Query 3648 TTAGATGTGAAGAAGTC-TTTAAGCACCGATTTCCGGTAGGAGAGGAAGCAGCAGCTAGT 3706 |||||||||||| |||| | || ||| ||||| |||| ||| | |||| | |||| Sbjct 1821467 TTAGATGTGAAG-AGTCACTCAAACACATGTTTCCTATAGGCGAGCAGGCAGAATCTAGC 1821409 Query 3707 AGAGTACATAAAAGGCT---TAAAATGATGCTAGATGGTAACGAGTCTTTTTGTTATGAT 3763 | |||||| ||| | | | | ||| |||| |||| | || |||||||| ||| Sbjct 1821408 AAAGTACACAAACGAATCAGTCAGATGTTGCT---TGGTTATGATAGTTTTTGTTTTGAC 1821352 Query 3764 TTTGATGATTTTAATGCCCAACATTC 3789 | ||||| || ||| | || || || Sbjct 1821351 TACGATGACTTCAATTCTCAGCACTC 1821326 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 15897596696280